Item talk:Q66832
From geokb
{
"USGS Publications Warehouse": { "schema": { "@context": "https://schema.org", "@type": "CreativeWork", "additionalType": "USGS Numbered Series", "name": "Detection of viral hemorrhagic septicemia virus", "identifier": [ { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse IndexID", "value": "fs20073055", "url": "https://pubs.usgs.gov/publication/fs20073055" }, { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse Internal ID", "value": 80133 }, { "@type": "PropertyValue", "propertyID": "DOI", "value": "10.3133/fs20073055", "url": "https://doi.org/10.3133/fs20073055" } ], "inLanguage": "en", "isPartOf": [ { "@type": "CreativeWorkSeries", "name": "Fact Sheet" } ], "datePublished": "2007", "dateModified": "2012-06-13", "abstract": "Viral hemorrhagic septicemia virus (VHSV) is considered to be one of the most important viral pathogens of finfish and is listed as reportable by many nations and international organizations (Office International des Epizooties 2006). Prior to 1988, VHSV was thought to be limited to Europe (Wolf 1988; Smail 1999). Subsequently, it was shown that the virus is endemic among many marine and anadromous fish species in both the Pacific and Atlantic Oceans (Meyers and Winton 1995; Skall et al. 2005). Genetic analysis reveals that isolates of VHSV can be divided into four genotypes that generally correlate with geographic location with the North American isolates generally falling into VHSV Genotype IV (Snow et al. 2004). In 2005-2006, reports from the Great Lakes region indicated that wild fish had experienced disease or, in some cases, very large die-offs from VHSV (Elsayed et al. 2006, Lumsden et al. 2007). The new strain from the Great Lakes, now identified as VHSV Genotype IVb, appears most closely related to isolates of VHSV from mortalities that occurred during 2000-2004 in rivers and near-shore areas of New Brunswick and Nova Scotia, Canada (Gagne et al. 2007). The type IVb isolate found in the Great Lakes region is the only strain outside of Europe that has been associated with significant mortality in freshwater species.", "description": "4 p.", "publisher": { "@type": "Organization", "name": "Geological Survey (U.S.)" }, "author": [ { "@type": "Person", "name": "Kurath, Gael gkurath@usgs.gov", "givenName": "Gael", "familyName": "Kurath", "email": "gkurath@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0003-3294-560X", "url": "https://orcid.org/0000-0003-3294-560X" }, "affiliation": [ { "@type": "Organization", "name": "Western Fisheries Research Center", "url": "https://www.usgs.gov/centers/western-fisheries-research-center" } ] }, { "@type": "Person", "name": "Winton, James", "givenName": "James", "familyName": "Winton" }, { "@type": "Person", "name": "Batts, William", "givenName": "William", "familyName": "Batts" } ], "funder": [ { "@type": "Organization", "name": "Western Fisheries Research Center", "url": "https://www.usgs.gov/centers/western-fisheries-research-center" } ] } }, "OpenAlex": { "abstract_inverted_index": { "Viral": [ 0 ], "hemorrhagic": [ 1 ], "septicemia": [ 2 ], "virus": [ 3, 55 ], "(VHSV)": [ 4 ], "is": [ 5, 19, 56, 199 ], "considered": [ 6 ], "to": [ 7, 35, 40, 43, 163 ], "be": [ 8, 41, 88 ], "one": [ 9 ], "of": [ 10, 16, 85, 165, 178, 204 ], "the": [ 11, 54, 67, 100, 118, 150, 195, 200 ], "most": [ 12, 160 ], "important": [ 13 ], "viral": [ 14 ], "pathogens": [ 15 ], "finfish": [ 17 ], "and": [ 18, 26, 61, 69, 73, 175, 181 ], "listed": [ 20 ], "as": [ 21, 155 ], "reportable": [ 22 ], "by": [ 23 ], "many": [ 24, 59 ], "nations": [ 25 ], "international": [ 27 ], "organizations": [ 28 ], "(Office": [ 29 ], "International": [ 30 ], "des": [ 31 ], "Epizooties": [ 32 ], "2006).": [ 33 ], "Prior": [ 34 ], "1988,": [ 36 ], "VHSV": [ 37, 86, 107, 137, 156, 166 ], "was": [ 38, 51 ], "thought": [ 39 ], "limited": [ 42 ], "Europe": [ 44, 205 ], "(Wolf": [ 45 ], "1988;": [ 46 ], "Smail": [ 47 ], "1999).": [ 48 ], "Subsequently,": [ 49 ], "it": [ 50 ], "shown": [ 52 ], "that": [ 53, 83, 93, 123, 169, 206 ], "endemic": [ 57 ], "among": [ 58 ], "marine": [ 60 ], "anadromous": [ 62 ], "fish": [ 63, 125 ], "species": [ 64 ], "in": [ 65, 130, 173, 194, 213 ], "both": [ 66 ], "Pacific": [ 68 ], "Atlantic": [ 70 ], "Oceans": [ 71 ], "(Meyers": [ 72 ], "Winton": [ 74 ], "1995;": [ 75 ], "Skall": [ 76 ], "et": [ 77, 111, 139, 143, 186 ], "al.": [ 78, 112, 140, 144, 187 ], "2005).": [ 79 ], "Genetic": [ 80 ], "analysis": [ 81 ], "reveals": [ 82 ], "isolates": [ 84, 103, 164 ], "can": [ 87 ], "divided": [ 89 ], "into": [ 90, 106 ], "four": [ 91 ], "genotypes": [ 92 ], "generally": [ 94, 104 ], "correlate": [ 95 ], "with": [ 96, 99, 210 ], "geographic": [ 97 ], "location": [ 98 ], "North": [ 101 ], "American": [ 102 ], "falling": [ 105 ], "Genotype": [ 108, 157 ], "IV": [ 109 ], "(Snow": [ 110 ], "2004).": [ 113 ], "In": [ 114 ], "2005-2006,": [ 115 ], "reports": [ 116 ], "from": [ 117, 136, 149, 167 ], "Great": [ 119, 151, 196 ], "Lakes": [ 120, 197 ], "region": [ 121, 198 ], "indicated": [ 122 ], "wild": [ 124 ], "had": [ 126 ], "experienced": [ 127 ], "disease": [ 128 ], "or,": [ 129 ], "some": [ 131 ], "cases,": [ 132 ], "very": [ 133 ], "large": [ 134 ], "die-offs": [ 135 ], "(Elsayed": [ 138 ], "2006,": [ 141 ], "Lumsden": [ 142 ], "2007).": [ 145, 188 ], "The": [ 146, 189 ], "new": [ 147 ], "strain": [ 148, 202 ], "Lakes,": [ 152 ], "now": [ 153 ], "identified": [ 154 ], "IVb,": [ 158 ], "appears": [ 159 ], "closely": [ 161 ], "related": [ 162 ], "mortalities": [ 168 ], "occurred": [ 170 ], "during": [ 171 ], "2000-2004": [ 172 ], "rivers": [ 174 ], "near-shore": [ 176 ], "areas": [ 177 ], "New": [ 179 ], "Brunswick": [ 180 ], "Nova": [ 182 ], "Scotia,": [ 183 ], "Canada": [ 184 ], "(Gagne": [ 185 ], "type": [ 190 ], "IVb": [ 191 ], "isolate": [ 192 ], "found": [ 193 ], "only": [ 201 ], "outside": [ 203 ], "has": [ 207 ], "been": [ 208 ], "associated": [ 209 ], "significant": [ 211 ], "mortality": [ 212 ], "freshwater": [ 214 ], "species.": [ 215 ] }, "apc_list": null, "apc_paid": null, "authorships": [ { "author_position": "first", "author": { "id": "https://openalex.org/A5033068747", "display_name": "James R. Winton", "orcid": "https://orcid.org/0000-0002-3505-5509" }, "institutions": [], "countries": [], "is_corresponding": false, "raw_author_name": "James Winton", "raw_affiliation_strings": [], "affiliations": [] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5077553505", "display_name": "Gael Kurath", "orcid": "https://orcid.org/0000-0003-3294-560X" }, "institutions": [], "countries": [], "is_corresponding": false, "raw_author_name": "Gael Kurath", "raw_affiliation_strings": [], "affiliations": [] }, { "author_position": "last", "author": { "id": "https://openalex.org/A5022201920", "display_name": "William N. Batts", "orcid": null }, "institutions": [], "countries": [], "is_corresponding": false, "raw_author_name": "William Batts", "raw_affiliation_strings": [], "affiliations": [] } ], "best_oa_location": { "is_oa": true, "landing_page_url": "https://doi.org/10.3133/fs20073055", "pdf_url": "https://pubs.usgs.gov/fs/2007/3055/fs20073055.pdf", "source": { "id": "https://openalex.org/S4210206611", "display_name": "Fact sheet", "issn_l": "2327-6916", "issn": [ "2327-6916", "2327-6932" ], "is_oa": true, "is_in_doaj": false, "is_core": false, "host_organization": "https://openalex.org/P4310319934", "host_organization_name": "United States Geological Survey", "host_organization_lineage": [ "https://openalex.org/P4310319934", "https://openalex.org/P4310316088" ], "host_organization_lineage_names": [ "United States Geological Survey", "United States Department of the Interior" ], "type": "journal" }, "license": null, "license_id": null, "version": "publishedVersion", "is_accepted": true, "is_published": true }, "biblio": { "volume": null, "issue": null, "first_page": null, "last_page": null }, "citation_normalized_percentile": { "value": 0.663156, "is_in_top_1_percent": false, "is_in_top_10_percent": false }, "cited_by_api_url": "https://api.openalex.org/works?filter=cites:W1567098892", "cited_by_count": 14, "cited_by_percentile_year": { "min": 86, "max": 87 }, "concepts": [ { "id": "https://openalex.org/c116675565", "wikidata": "https://www.wikidata.org/wiki/Q3241045", "display_name": "Outbreak", "level": 2, "score": 0.59169674, "qid": null }, { "id": "https://openalex.org/c135763542", "wikidata": "https://www.wikidata.org/wiki/Q106016", "display_name": "Genotype", "level": 3, "score": 0.5873552, "qid": "Q159360" }, { "id": "https://openalex.org/c86803240", "wikidata": "https://www.wikidata.org/wiki/Q420", "display_name": "Biology", "level": 0, "score": 0.58119655, "qid": "Q158998" }, { "id": "https://openalex.org/c2909396630", "wikidata": "https://www.wikidata.org/wiki/Q18819341", "display_name": "Iridovirus", "level": 3, "score": 0.45937005, "qid": null }, { "id": "https://openalex.org/c159047783", "wikidata": "https://www.wikidata.org/wiki/Q7215", "display_name": "Virology", "level": 1, "score": 0.44807318, "qid": "Q159037" }, { "id": "https://openalex.org/c2522874641", "wikidata": "https://www.wikidata.org/wiki/Q808", "display_name": "Virus", "level": 2, "score": 0.40761453, "qid": null }, { "id": "https://openalex.org/c505870484", "wikidata": "https://www.wikidata.org/wiki/Q180538", "display_name": "Fishery", "level": 1, "score": 0.34906346, "qid": "Q226243" }, { "id": "https://openalex.org/c205649164", "wikidata": "https://www.wikidata.org/wiki/Q1071", "display_name": "Geography", "level": 0, "score": 0.32846254, "qid": "Q158983" }, { "id": "https://openalex.org/c54355233", "wikidata": "https://www.wikidata.org/wiki/Q7162", "display_name": "Genetics", "level": 1, "score": 0.077495486, "qid": "Q158979" }, { "id": "https://openalex.org/c104317684", "wikidata": "https://www.wikidata.org/wiki/Q7187", "display_name": "Gene", "level": 2, "score": 0.0, "qid": null } ], "corresponding_author_ids": [], "corresponding_institution_ids": [], "countries_distinct_count": 0, "counts_by_year": [ { "year": 2018, "cited_by_count": 1 }, { "year": 2015, "cited_by_count": 1 }, { "year": 2014, "cited_by_count": 1 }, { "year": 2013, "cited_by_count": 3 }, { "year": 2012, "cited_by_count": 1 } ], "created_date": "2016-06-24", "datasets": [], "display_name": "Detection of viral hemorrhagic septicemia virus", "doi": "https://doi.org/10.3133/fs20073055", "fulltext_origin": "pdf", "fwci": 0.26, "grants": [], "has_fulltext": true, "id": "https://openalex.org/W1567098892", "ids": { "openalex": "https://openalex.org/W1567098892", "doi": "https://doi.org/10.3133/fs20073055", "mag": "1567098892" }, "indexed_in": [ "crossref" ], "institutions_distinct_count": 0, "is_paratext": false, "is_retracted": false, "keywords": [ { "id": "https://openalex.org/keywords/fish-immunology", "display_name": "Fish Immunology", "score": 0.513998 }, { "id": "https://openalex.org/keywords/iridovirus", "display_name": "Iridovirus", "score": 0.45937005 } ], "language": "en", "locations": [ { "is_oa": true, "landing_page_url": "https://doi.org/10.3133/fs20073055", "pdf_url": "https://pubs.usgs.gov/fs/2007/3055/fs20073055.pdf", "source": { "id": "https://openalex.org/S4210206611", "display_name": "Fact sheet", "issn_l": "2327-6916", "issn": [ "2327-6916", "2327-6932" ], "is_oa": true, "is_in_doaj": false, "is_core": false, "host_organization": "https://openalex.org/P4310319934", "host_organization_name": "United States Geological Survey", "host_organization_lineage": [ "https://openalex.org/P4310319934", "https://openalex.org/P4310316088" ], "host_organization_lineage_names": [ "United States Geological Survey", "United States Department of the Interior" ], "type": "journal" }, "license": null, "license_id": null, "version": "publishedVersion", "is_accepted": true, "is_published": true } ], "locations_count": 1, "mesh": [], "ngrams_url": "https://api.openalex.org/works/W1567098892/ngrams", "open_access": { "is_oa": true, "oa_status": "bronze", "oa_url": "https://pubs.usgs.gov/fs/2007/3055/fs20073055.pdf", "any_repository_has_fulltext": false }, "primary_location": { "is_oa": true, "landing_page_url": "https://doi.org/10.3133/fs20073055", "pdf_url": "https://pubs.usgs.gov/fs/2007/3055/fs20073055.pdf", "source": { "id": "https://openalex.org/S4210206611", "display_name": "Fact sheet", "issn_l": "2327-6916", "issn": [ "2327-6916", "2327-6932" ], "is_oa": true, "is_in_doaj": false, "is_core": false, "host_organization": "https://openalex.org/P4310319934", "host_organization_name": "United States Geological Survey", "host_organization_lineage": [ "https://openalex.org/P4310319934", "https://openalex.org/P4310316088" ], "host_organization_lineage_names": [ "United States Geological Survey", "United States Department of the Interior" ], "type": "journal" }, "license": null, "license_id": null, "version": "publishedVersion", "is_accepted": true, "is_published": true }, "primary_topic": { "id": "https://openalex.org/T10506", "display_name": "Immunological Responses in Aquatic Organisms", "score": 0.9997, "subfield": { "id": "https://openalex.org/subfields/2403", "display_name": "Immunology" }, "field": { "id": "https://openalex.org/fields/24", "display_name": "Immunology and Microbiology" }, "domain": { "id": "https://openalex.org/domains/1", "display_name": "Life Sciences" } }, "publication_date": "2007-01-01", "publication_year": 2007, "referenced_works": [ "https://openalex.org/W159109579", "https://openalex.org/W1992468375", "https://openalex.org/W1994911972", "https://openalex.org/W2007474216", "https://openalex.org/W2023024586", "https://openalex.org/W2586545019", "https://openalex.org/W4312715642" ], "referenced_works_count": 7, "related_works": [ "https://openalex.org/W757222660", "https://openalex.org/W4312586141", "https://openalex.org/W2886634741", "https://openalex.org/W2495883595", "https://openalex.org/W2126160105", "https://openalex.org/W2102567522", "https://openalex.org/W2033299721", "https://openalex.org/W1977322551", "https://openalex.org/W1967111288", "https://openalex.org/W189086276" ], "sustainable_development_goals": [], "title": "Detection of viral hemorrhagic septicemia virus", "topics": [ { "id": "https://openalex.org/T10506", "display_name": "Immunological Responses in Aquatic Organisms", "score": 0.9997, "subfield": { "id": "https://openalex.org/subfields/2403", "display_name": "Immunology" }, "field": { "id": "https://openalex.org/fields/24", "display_name": "Immunology and Microbiology" }, "domain": { "id": "https://openalex.org/domains/1", "display_name": "Life Sciences" } }, { "id": "https://openalex.org/T11495", "display_name": "Viral Diseases in Livestock and Poultry", "score": 0.9976, "subfield": { "id": "https://openalex.org/subfields/1103", "display_name": "Animal Science and Zoology" }, "field": { "id": "https://openalex.org/fields/11", "display_name": "Agricultural and Biological Sciences" }, "domain": { "id": "https://openalex.org/domains/1", "display_name": "Life Sciences" } }, { "id": "https://openalex.org/T11688", "display_name": "Bacterial Pathogenesis in Animal and Human Health", "score": 0.9764, "subfield": { "id": "https://openalex.org/subfields/2404", "display_name": "Microbiology" }, "field": { "id": "https://openalex.org/fields/24", "display_name": "Immunology and Microbiology" }, "domain": { "id": "https://openalex.org/domains/1", "display_name": "Life Sciences" } } ], "type": "article", "type_crossref": "journal-article", "updated_date": "2024-08-09T02:55:36.831797", "versions": [], "qid": "Q66832" }
}