Item talk:Q312524
From geokb
{
"USGS Publications Warehouse": { "@context": "https://schema.org", "@type": "Article", "additionalType": "Journal Article", "name": "Estimating migration timing and abundance in partial migratory systems by integrating continuous antenna detections with physical captures", "identifier": [ { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse IndexID", "value": "70255026", "url": "https://pubs.usgs.gov/publication/70255026" }, { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse Internal ID", "value": 70255026 }, { "@type": "PropertyValue", "propertyID": "DOI", "value": "10.1111/1365-2656.14076", "url": "https://doi.org/10.1111/1365-2656.14076" } ], "journal": { "@type": "Periodical", "name": "Journal of Animal Ecology", "volumeNumber": "93", "issueNumber": "7" }, "inLanguage": "en", "isPartOf": [ { "@type": "CreativeWorkSeries", "name": "Journal of Animal Ecology" } ], "datePublished": "2024", "dateModified": "2024-07-15", "abstract": "Many populations migrate between two different habitats (e.g. wintering/foraging to breeding area, mainstem\u2013tributary, river\u2013lake, river\u2013ocean, river\u2013side channel) as part of their life history. Detection technologies, such as passive integrated transponder (PIT) antennas or sonic receivers, can be placed at boundaries between habitats (e.g. near the confluence of rivers) to detect migratory movements of marked animals. Often, these detection systems have high detection probabilities and detect many individuals but are limited in their ability to make inferences about abundance because only marked individuals can be detected.Here, we introduce a mark\u2013recapture modelling approach that uses detections from a double-array PIT antenna system to imply movement directionality from arrays and estimate migration timing. Additionally, when combined with physical captures, the model can be used to estimate abundances for both migratory and non-migratory groups and help quantify partial migration. We first test our approach using simulation, and results indicate our approach displayed negligible bias for total abundance (less than \u00b11%) and slight biases for state-specific abundance estimates (\u00b11%\u20136%).We fit our model to array detections and physical captures of three native fishes (humpback chub [Gila cypha], flannelmouth sucker [Catostomus latipinnis] and bluehead sucker [Catostomus discobolus]) in the Little Colorado River (LCR) in Grand Canyon, AZ, a system that exhibits partial migration (i.e. includes residents and migrants). Abundance estimates from our model confirm that, for all three species, migratory individuals are much more numerous than residents.There was little difference in movement timing between 2021 (a year without preceding winter/spring floods) and 2022 (a year with a small flood occurring in early April). In both years, flannelmouth sucker arrived in mid-March whereas humpback chub and bluehead sucker arrivals occurred early- to mid-April. With humpback chub and flannelmouth sucker, movement timing was influenced by body size so that large individuals were more likely to arrive early compared to smaller individuals.With more years of data, this model framework could be used to evaluate ecological questions pertaining to flow cues and movement timing or intensity, relative trends in migrants versus residents and ecological drivers of skipped spawning.", "description": "16 p., Data Release", "publisher": { "@type": "Organization", "name": "British Ecological Society" }, "author": [ { "@type": "Person", "name": "Dzul, Maria C. mdzul@usgs.gov", "givenName": "Maria C.", "familyName": "Dzul", "email": "mdzul@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0002-4798-5930", "url": "https://orcid.org/0000-0002-4798-5930" }, "affiliation": [ { "@type": "Organization", "name": "Southwest Biological Science Center", "url": "https://www.usgs.gov/centers/southwest-biological-science-center" } ] }, { "@type": "Person", "name": "Kendall, William L.", "givenName": "William L.", "familyName": "Kendall", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0003-0084-9891", "url": "https://orcid.org/0000-0003-0084-9891" }, "affiliation": [ { "@type": "Organization", "name": "Coop Res Unit Seattle", "url": "https://www1.usgs.gov/coopunits/unit/Washington" } ] }, { "@type": "Person", "name": "Yackulic, Charles", "givenName": "Charles", "familyName": "Yackulic", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0001-9661-0724", "url": "https://orcid.org/0000-0001-9661-0724" }, "affiliation": [ { "@type": "Organization", "name": "Southwest Biological Science Center", "url": "https://www.usgs.gov/centers/southwest-biological-science-center" } ] }, { "@type": "Person", "name": "Van Haverbeke, D.R.", "givenName": "D.R.", "familyName": "Van Haverbeke", "affiliation": [ { "@type": "Organization", "name": "U.S. Fish and Wildlife Service Arizona Fish and Wildlife Conservation Office 2500 E Pine Knoll Dr. Flagstaff, AZ, 86001, USA" } ] }, { "@type": "Person", "name": "Mackinnon, P.", "givenName": "P.", "familyName": "Mackinnon", "affiliation": [ { "@type": "Organization", "name": "Utah State University Department of Watershed Sciences 5210 Old Main Hill Logan, UT, 94322, USA" } ] }, { "@type": "Person", "name": "Young, K.", "givenName": "K.", "familyName": "Young", "affiliation": [ { "@type": "Organization", "name": "U.S. Fish and Wildlife Service Arizona Fish and Wildlife Conservation Office 2500 E Pine Knoll Dr. Flagstaff, AZ, 86001, USA" } ] }, { "@type": "Person", "name": "Pillow, M.", "givenName": "M.", "familyName": "Pillow", "affiliation": [ { "@type": "Organization", "name": "U.S. Fish and Wildlife Service Arizona Fish and Wildlife Conservation Office 2500 E Pine Knoll Dr. Flagstaff, AZ, 86001, USA" } ] }, { "@type": "Person", "name": "Thomas, Joseph E", "givenName": "Joseph E", "familyName": "Thomas", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0003-1222-7061", "url": "https://orcid.org/0000-0003-1222-7061" }, "affiliation": [ { "@type": "Organization", "name": "Southwest Biological Science Center", "url": "https://www.usgs.gov/centers/southwest-biological-science-center" } ] } ], "funder": [ { "@type": "Organization", "name": "Southwest Biological Science Center", "url": "https://www.usgs.gov/centers/southwest-biological-science-center" } ] }, "OpenAlex": { "_id": "https://openalex.org/w4393459195", "abstract_inverted_index": { "Abstract": [ 0 ], "Many": [ 1 ], "populations": [ 2 ], "migrate": [ 3 ], "between": [ 4, 41, 246 ], "two": [ 5 ], "different": [ 6 ], "habitats": [ 7, 42 ], "(e.g.": [ 8, 43 ], "wintering/foraging": [ 9 ], "to": [ 10, 49, 74, 102, 123, 170, 283, 305, 309, 323, 328 ], "breeding": [ 11 ], "area,": [ 12 ], "mainstem\u2013tributary,": [ 13 ], "river\u2013lake,": [ 14 ], "river\u2013ocean,": [ 15 ], "river\u2013side": [ 16 ], "channel)": [ 17 ], "as": [ 18, 27 ], "part": [ 19 ], "of": [ 20, 47, 53, 176, 315, 345 ], "their": [ 21, 72 ], "life": [ 22 ], "history.": [ 23 ], "Detection": [ 24 ], "technologies,": [ 25 ], "such": [ 26 ], "passive": [ 28 ], "integrated": [ 29 ], "transponder": [ 30 ], "(PIT)": [ 31 ], "antennas": [ 32 ], "or": [ 33, 334 ], "sonic": [ 34 ], "receivers,": [ 35 ], "can": [ 36, 83, 120 ], "be": [ 37, 84, 121, 321 ], "placed": [ 38 ], "at": [ 39 ], "boundaries": [ 40 ], "near": [ 44 ], "the": [ 45, 118, 200 ], "confluence": [ 46 ], "rivers)": [ 48 ], "detect": [ 50, 65 ], "migratory": [ 51, 128, 231 ], "movements": [ 52 ], "marked": [ 54, 81 ], "animals.": [ 55 ], "Often,": [ 56 ], "these": [ 57 ], "detection": [ 58, 62 ], "systems": [ 59 ], "have": [ 60 ], "high": [ 61 ], "probabilities": [ 63 ], "and": [ 64, 108, 129, 132, 144, 158, 173, 192, 218, 254, 277, 288, 331, 342 ], "many": [ 66 ], "individuals": [ 67, 82, 232, 301 ], "but": [ 68 ], "are": [ 69, 233 ], "limited": [ 70 ], "in": [ 71, 199, 205, 243, 263, 272, 338 ], "ability": [ 73 ], "make": [ 75 ], "inferences": [ 76 ], "about": [ 77 ], "abundance": [ 78, 154, 163 ], "because": [ 79 ], "only": [ 80 ], "detected.": [ 85 ], "Here,": [ 86 ], "we": [ 87 ], "introduce": [ 88 ], "a": [ 89, 97, 209, 259 ], "mark\u2013recapture": [ 90 ], "modelling": [ 91 ], "approach": [ 92, 141, 148 ], "that": [ 93, 211, 299 ], "uses": [ 94 ], "detections": [ 95, 172 ], "from": [ 96, 106, 222 ], "double\u2010array": [ 98 ], "PIT": [ 99 ], "antenna": [ 100 ], "system": [ 101, 210 ], "imply": [ 103 ], "movement": [ 104, 244, 291, 332 ], "directionality": [ 105 ], "arrays": [ 107 ], "estimate": [ 109, 124 ], "migration": [ 110, 214 ], "timing.": [ 111 ], "Additionally,": [ 112 ], "when": [ 113 ], "combined": [ 114 ], "with": [ 115, 258 ], "physical": [ 116, 174 ], "captures,": [ 117 ], "model": [ 119, 169, 224, 318 ], "used": [ 122, 322 ], "abundances": [ 125 ], "for": [ 126, 152, 161, 227 ], "both": [ 127, 267 ], "non\u2010migratory": [ 130 ], "groups": [ 131 ], "help": [ 133 ], "quantify": [ 134 ], "partial": [ 135, 213 ], "migration.": [ 136 ], "We": [ 137, 166 ], "first": [ 138 ], "test": [ 139 ], "our": [ 140, 147, 168, 223 ], "using": [ 142 ], "simulation,": [ 143 ], "results": [ 145 ], "indicate": [ 146 ], "displayed": [ 149 ], "negligible": [ 150 ], "bias": [ 151 ], "total": [ 153 ], "(less": [ 155 ], "than": [ 156, 237 ], "\u00b11%)": [ 157 ], "slight": [ 159 ], "biases": [ 160 ], "state\u2010specific": [ 162 ], "estimates": [ 164, 221 ], "(\u00b11%\u20136%).": [ 165 ], "fit": [ 167 ], "array": [ 171 ], "captures": [ 175 ], "three": [ 177, 229 ], "native": [ 178 ], "fishes": [ 179 ], "(humpback": [ 180 ], "chub": [ 181, 276, 287 ], "[": [ 182, 188, 195 ], "Gila": [ 183 ], "cypha": [ 184 ], "],": [ 185 ], "flannelmouth": [ 186, 269, 289 ], "sucker": [ 187, 194, 270, 279 ], "Catostomus": [ 189, 196 ], "latipinnis": [ 190 ], "]": [ 191 ], "bluehead": [ 193, 278 ], "discobolus": [ 197 ], "])": [ 198 ], "Little": [ 201 ], "Colorado": [ 202 ], "River": [ 203 ], "(LCR)": [ 204 ], "Grand": [ 206 ], "Canyon,": [ 207 ], "AZ,": [ 208 ], "exhibits": [ 212 ], "(i.e.": [ 215 ], "includes": [ 216 ], "residents": [ 217, 341 ], "migrants).": [ 219 ], "Abundance": [ 220 ], "confirm": [ 225 ], "that,": [ 226 ], "all": [ 228 ], "species,": [ 230 ], "much": [ 234 ], "more": [ 235, 303, 313 ], "numerous": [ 236 ], "residents.": [ 238 ], "There": [ 239 ], "was": [ 240, 293 ], "little": [ 241 ], "difference": [ 242 ], "timing": [ 245, 292, 333 ], "2021": [ 247 ], "(a": [ 248, 256 ], "year": [ 249, 257 ], "without": [ 250 ], "preceding": [ 251 ], "winter/spring": [ 252 ], "floods)": [ 253 ], "2022": [ 255 ], "small": [ 260 ], "flood": [ 261 ], "occurring": [ 262 ], "early": [ 264, 307 ], "April).": [ 265 ], "In": [ 266 ], "years,": [ 268 ], "arrived": [ 271 ], "mid\u2010March": [ 273 ], "whereas": [ 274 ], "humpback": [ 275, 286 ], "arrivals": [ 280 ], "occurred": [ 281 ], "early\u2010": [ 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{ "id": "https://openalex.org/I1286329397", "display_name": "United States Geological Survey", "ror": "https://ror.org/035a68863", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1286329397", "https://openalex.org/I1335927249" ] } ], "countries": [ "US" ], "is_corresponding": true, "raw_author_name": "M. C. Dzul", "raw_affiliation_strings": [ "Southwest Biological Science Center, U.S. Geological Survey, Grand Canyon Monitoring and Research Center, Flagstaff, Arizona, USA" ], "affiliations": [ { "raw_affiliation_string": "Southwest Biological Science Center, U.S. Geological Survey, Grand Canyon Monitoring and Research Center, Flagstaff, Arizona, USA", "institution_ids": [ "https://openalex.org/I1286329397" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5027168385", "display_name": "William L. Kendall", "orcid": "https://orcid.org/0000-0003-0084-9891" }, "institutions": [ { "id": "https://openalex.org/I92446798", "display_name": "Colorado State University", "ror": "https://ror.org/03k1gpj17", "country_code": "US", "type": "education", "lineage": [ "https://openalex.org/I4210131357", "https://openalex.org/I92446798" ] }, { "id": "https://openalex.org/I1286329397", "display_name": "United States Geological Survey", "ror": "https://ror.org/035a68863", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1286329397", "https://openalex.org/I1335927249" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "W. L. Kendall", "raw_affiliation_strings": [ "Colorado Cooperative Fish and Wildlife Research Unit, U.S. Geological Survey, Colorado State University, Fort Collins, Colorado, USA" ], "affiliations": [ { "raw_affiliation_string": "Colorado Cooperative Fish and Wildlife Research Unit, U.S. Geological Survey, Colorado State University, Fort Collins, Colorado, USA", "institution_ids": [ "https://openalex.org/I92446798", "https://openalex.org/I1286329397" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5034336468", "display_name": "Charles B. Yackulic", "orcid": "https://orcid.org/0000-0001-9661-0724" }, "institutions": [ { "id": "https://openalex.org/I1286329397", "display_name": "United States Geological Survey", "ror": "https://ror.org/035a68863", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1286329397", "https://openalex.org/I1335927249" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "C. B. Yackulic", "raw_affiliation_strings": [ "Southwest Biological Science Center, U.S. Geological Survey, Grand Canyon Monitoring and Research Center, Flagstaff, Arizona, USA" ], "affiliations": [ { "raw_affiliation_string": "Southwest Biological Science Center, U.S. Geological Survey, Grand Canyon Monitoring and Research Center, Flagstaff, Arizona, USA", "institution_ids": [ "https://openalex.org/I1286329397" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5062673256", "display_name": "David R. Van Haverbeke", "orcid": null }, "institutions": [ { "id": "https://openalex.org/I1343028186", "display_name": "United States Fish and Wildlife Service", "ror": "https://ror.org/04k7dar27", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1335927249", "https://openalex.org/I1343028186" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "D. R. Van\u00a0Haverbeke", "raw_affiliation_strings": [ "U.S. Fish and Wildlife Service, Arizona Fish and Wildlife Conservation Office, Flagstaff, Arizona, USA" ], "affiliations": [ { "raw_affiliation_string": "U.S. Fish and Wildlife Service, Arizona Fish and Wildlife Conservation Office, Flagstaff, Arizona, USA", "institution_ids": [ "https://openalex.org/I1343028186" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5027118715", "display_name": "Peter D. MacKinnon", "orcid": null }, "institutions": [ { "id": "https://openalex.org/I121980950", "display_name": "Utah State University", "ror": "https://ror.org/00h6set76", "country_code": "US", "type": "education", "lineage": [ "https://openalex.org/I121980950" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "P. Mackinnon", "raw_affiliation_strings": [ "Department of Watershed Sciences, Utah State University, Logan, Utah, USA" ], "affiliations": [ { "raw_affiliation_string": "Department of Watershed Sciences, Utah State University, Logan, Utah, USA", "institution_ids": [ "https://openalex.org/I121980950" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5101326684", "display_name": "Young Ka", "orcid": null }, "institutions": [ { "id": "https://openalex.org/I1343028186", "display_name": "United States Fish and Wildlife Service", "ror": "https://ror.org/04k7dar27", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1335927249", "https://openalex.org/I1343028186" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "K. Young", "raw_affiliation_strings": [ "U.S. Fish and Wildlife Service, Arizona Fish and Wildlife Conservation Office, Flagstaff, Arizona, USA" ], "affiliations": [ { "raw_affiliation_string": "U.S. Fish and Wildlife Service, Arizona Fish and Wildlife Conservation Office, Flagstaff, Arizona, USA", "institution_ids": [ "https://openalex.org/I1343028186" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5069592482", "display_name": "Michael J. Pillow", "orcid": null }, "institutions": [ { "id": "https://openalex.org/I1343028186", "display_name": "United States Fish and Wildlife Service", "ror": "https://ror.org/04k7dar27", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1335927249", "https://openalex.org/I1343028186" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "M. J. 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Thomas", "raw_affiliation_strings": [ "Southwest Biological Science Center, U.S. Geological Survey, Grand Canyon Monitoring and Research Center, Flagstaff, Arizona, USA" ], "affiliations": [ { "raw_affiliation_string": "Southwest Biological Science Center, U.S. Geological Survey, Grand Canyon Monitoring and Research Center, Flagstaff, Arizona, USA", "institution_ids": [ "https://openalex.org/I1286329397" ] } ] } ], "best_oa_location": null, "biblio": { "volume": "93", "issue": "7", "first_page": "796", "last_page": "811" }, "citation_normalized_percentile": null, "cited_by_api_url": "https://api.openalex.org/works?filter=cites:W4393459195", "cited_by_count": 0, "cited_by_percentile_year": { "min": 0, "max": 88 }, "concepts": [ { "id": "https://openalex.org/C77077793", "wikidata": "https://www.wikidata.org/wiki/Q336019", "display_name": "Abundance (ecology)", "level": 2, "score": 0.7731784 }, { "id": "https://openalex.org/C185933670", "wikidata": "https://www.wikidata.org/wiki/Q52105", 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"score": 0.34180045 }, { "id": "https://openalex.org/C205649164", "wikidata": "https://www.wikidata.org/wiki/Q1071", "display_name": "Geography", "level": 0, "score": 0.27360073 }, { "id": "https://openalex.org/C86803240", "wikidata": "https://www.wikidata.org/wiki/Q420", "display_name": "Biology", "level": 0, "score": 0.25552106 }, { "id": "https://openalex.org/C2908647359", "wikidata": "https://www.wikidata.org/wiki/Q2625603", "display_name": "Population", "level": 2, "score": 0.20467266 }, { "id": "https://openalex.org/C58640448", "wikidata": "https://www.wikidata.org/wiki/Q42515", "display_name": "Cartography", "level": 1, "score": 0.09537619 }, { "id": "https://openalex.org/C149923435", "wikidata": "https://www.wikidata.org/wiki/Q37732", "display_name": "Demography", "level": 1, "score": 0.0 }, { "id": "https://openalex.org/C144024400", "wikidata": "https://www.wikidata.org/wiki/Q21201", "display_name": "Sociology", "level": 0, "score": 0.0 } ], "corresponding_author_ids": [ 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