Item talk:Q304970
From geokb
{
"USGS Publications Warehouse": { "@context": "https://schema.org", "@type": "CreativeWork", "additionalType": "USGS Numbered Series", "name": "Developing fluvial fish species distribution models across the conterminous United States\u2014A framework for management and conservation", "identifier": [ { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse IndexID", "value": "sir20235088", "url": "https://pubs.usgs.gov/publication/sir20235088" }, { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse Internal ID", "value": 70249976 }, { "@type": "PropertyValue", "propertyID": "DOI", "value": "10.3133/sir20235088", "url": "https://doi.org/10.3133/sir20235088" } ], "inLanguage": "en", "isPartOf": [ { "@type": "CreativeWorkSeries", "name": "Scientific Investigations Report" } ], "datePublished": "2023", "dateModified": "2023-12-14", "abstract": "This report explains the steps and specific methods used to predict fluvial fish occurrences in their native ranges for the conterminous United States. In this study, boosted regression tree models predict distributions of 271 ecologically important fluvial fish species using relations between fish presence/absence and 22 natural and anthropogenic landscape variables. Models developed for the freshwater portions of the ranges for species represented 28 families. Cyprinidae was the family with the most species (87 of 271) modeled for this study, followed by Percidae (34) and Ictaluridae (17). Model predictive performance was evaluated using four metrics: area under the receiver operating characteristic curve, sensitivity, specificity, and True Skill Statistic, which are all from tenfold cross-validation results. The relative importance of the predictor variables in the boosted regression tree models was calculated and ranked for each species. The three strongest natural predictors of fish distributions were network catchment area, the mean annual air temperature of the local catchment, and the maximum elevation of the local catchment, while the three strongest anthropogenic predictors were downstream main stem dam density, distance to downstream main stem dam, and the percentage of pasture/hay land use area within network catchment boundaries. Study results showed 61 fish species were sensitive to climate variables, and 40 fish species were sensitive to anthropogenic stressors. The models developed in this study can be used to derive critical information regarding habitat protection priorities, anthropogenic threats, and potential effects of climate change on habitat suitability, aiding in efforts to conserve fluvial fishes now and into the future.", "description": "Report: vii, 41 p.; Data Release", "publisher": { "@type": "Organization", "name": "U.S. Geological Survey" }, "author": [ { "@type": "Person", "name": "Yu, Hao", "givenName": "Hao", "familyName": "Yu", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0003-0775-9346", "url": "https://orcid.org/0000-0003-0775-9346" }, "affiliation": [ { "@type": "Organization", "name": "Department of Fisheries and Wildlife, Michigan State University, East Lansing, MI" } ] }, { "@type": "Person", "name": "Arthur R. Cooper", "familyName": "Arthur R. Cooper", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0002-0557-8560", "url": "https://orcid.org/0000-0002-0557-8560" }, "affiliation": [ { "@type": "Organization", "name": "Michigan State University, Department of Fisheries and Wildlife" } ] }, { "@type": "Person", "name": "Ross, Jared", "givenName": "Jared", "familyName": "Ross", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0002-0582-3589", "url": "https://orcid.org/0000-0002-0582-3589" }, "affiliation": [ { "@type": "Organization", "name": "Department of Fisheries and Wildlife, Michigan State University" } ] }, { "@type": "Person", "name": "McKerrow, Alexa amckerrow@usgs.gov", "givenName": "Alexa", "familyName": "McKerrow", "email": "amckerrow@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0002-8312-2905", "url": "https://orcid.org/0000-0002-8312-2905" }, "affiliation": [ { "@type": "Organization", "name": "Core Science Analytics and Synthesis", "url": "https://www.usgs.gov/programs/science-analytics-and-synthesis-sas" } ] }, { "@type": "Person", "name": "Wieferich, Daniel J. dwieferich@usgs.gov", "givenName": "Daniel J.", "familyName": "Wieferich", "email": "dwieferich@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0003-1554-7992", "url": "https://orcid.org/0000-0003-1554-7992" }, "affiliation": [ { "@type": "Organization", "name": "Office of the AD Core Science Systems", "url": "https://www.usgs.gov/mission-areas/core-science-systems" }, { "@type": "Organization", "name": "Core Science Analytics and Synthesis", "url": "https://www.usgs.gov/programs/science-analytics-and-synthesis-sas" } ] }, { "@type": "Person", "name": "Infante, Dana M.", "givenName": "Dana M.", "familyName": "Infante", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0003-1385-1587", "url": "https://orcid.org/0000-0003-1385-1587" }, "affiliation": [ { "@type": "Organization", "name": "Dept. of Fisheries and Wildlife," } ] } ], "funder": [ { "@type": "Organization", "name": "Science Analytics and Synthesis", "url": "https://www.usgs.gov/programs/science-analytics-and-synthesis-sas" } ], "spatialCoverage": [ { "@type": "Place", "additionalType": "country", "name": "United States", "url": "https://geonames.org/4074035" }, { "@type": "Place", "additionalType": "unknown", "name": "Conterminous United States" } ] }, "OpenAlex": { "_id": "https://openalex.org/w4388642278", "abstract_inverted_index": { "First": [ 0 ], "posted": [ 1 ], "November": [ 2 ], "13,": [ 3 ], "2023": [ 4 ], "For": [ 5 ], "additional": [ 6 ], "information,": [ 7 ], "contact:": [ 8 ], "Director,": [ 9 ], "Science": [ 10 ], "Analytics": [ 11 ], "and": [ 12, 29, 68, 71, 108, 128, 154, 180, 206, 229, 257, 274 ], "Synthesis": [ 13 ], "ProgramU.S.": [ 14 ], "Geological": [ 15 ], "SurveyP.O.": [ 16 ], "Box": [ 17 ], "25046,": [ 18 ], "Mail": [ 19 ], "Stop": [ 20 ], "302Denver,": [ 21 ], "CO": [ 22 ], "80225": [ 23 ], "This": [ 24 ], "report": [ 25 ], "explains": [ 26 ], "the": [ 27, 43, 78, 82, 91, 94, 121, 143, 147, 171, 177, 181, 185, 189, 207, 276 ], "steps": [ 28 ], "specific": [ 30 ], "methods": [ 31 ], "used": [ 32, 246 ], "to": [ 33, 201, 226, 235, 247, 269 ], "predict": [ 34, 54 ], "fluvial": [ 35, 60, 271 ], "fish": [ 36, 61, 66, 165, 222, 231 ], "occurrences": [ 37 ], "in": [ 38, 146, 241, 267 ], "their": [ 39 ], "native": [ 40 ], "ranges": [ 41, 83 ], "for": [ 42, 77, 84, 101, 156 ], "conterminous": [ 44 ], "United": [ 45 ], "States.": [ 46 ], "In": [ 47 ], "this": [ 48, 102, 242 ], "study,": [ 49, 103 ], "boosted": [ 50, 148 ], "regression": [ 51, 149 ], "tree": [ 52, 150 ], "models": [ 53, 151, 239 ], "distributions": [ 55, 166 ], "of": [ 56, 81, 98, 142, 164, 176, 184, 209, 260 ], "271": [ 57 ], "ecologically": [ 58 ], "important": [ 59 ], "species": [ 62, 85, 96, 223, 232 ], "using": [ 63, 116 ], "relations": [ 64 ], "between": [ 65 ], "presence/absence": [ 67 ], "22": [ 69 ], "natural": [ 70, 162 ], "anthropogenic": [ 72, 192, 236, 255 ], "landscape": [ 73 ], "variables.": [ 74 ], "Models": [ 75 ], "developed": [ 76, 240 ], "freshwater": [ 79 ], "portions": [ 80 ], "represented": [ 86 ], "28": [ 87 ], "families.": [ 88 ], "Cyprinidae": [ 89 ], "was": [ 90, 114, 152 ], "family": [ 92 ], "with": [ 93 ], "most": [ 95 ], "(87": [ 97 ], "271)": [ 99 ], "modeled": [ 100 ], "followed": [ 104 ], "by": [ 105 ], "Percidae": [ 106 ], "(34)": [ 107 ], "Ictaluridae": [ 109 ], "(17).": [ 110 ], "Model": [ 111 ], "predictive": [ 112 ], "performance": [ 113 ], "evaluated": [ 115 ], "four": [ 117 ], "metrics:": [ 118 ], "area": [ 119, 213 ], "under": [ 120 ], "receiver": [ 122 ], "operating": [ 123 ], "characteristic": [ 124 ], "curve,": [ 125 ], "sensitivity,": [ 126 ], "specificity,": [ 127 ], "True": [ 129 ], "Skill": [ 130 ], "Statistic,": [ 131 ], "which": [ 132 ], "are": [ 133 ], "all": [ 134 ], "from": [ 135 ], "tenfold": [ 136 ], "cross-validation": [ 137 ], "results.": [ 138 ], "The": [ 139, 159, 238 ], "relative": [ 140 ], "importance": [ 141 ], "predictor": [ 144 ], "variables": [ 145 ], "calculated": [ 153 ], "ranked": [ 155 ], "each": [ 157 ], "species.": [ 158 ], "three": [ 160, 190 ], "strongest": [ 161, 191 ], "predictors": [ 163, 193 ], "were": [ 167, 194, 224, 233 ], "network": [ 168, 215 ], "catchment": [ 169, 216 ], "area,": [ 170 ], "mean": [ 172 ], "annual": [ 173 ], "air": [ 174 ], "temperature": [ 175 ], "local": [ 178, 186 ], "catchment,": [ 179, 187 ], "maximum": [ 182 ], "elevation": [ 183 ], "while": [ 188 ], "downstream": [ 195, 202 ], "main": [ 196, 203 ], "stem": [ 197, 204 ], "dam": [ 198 ], "density,": [ 199 ], "distance": [ 200 ], "dam,": [ 205 ], "percentage": [ 208 ], "pasture/hay": [ 210 ], "land": [ 211 ], "use": [ 212 ], "within": [ 214 ], "boundaries.": [ 217 ], "Study": [ 218 ], "results": [ 219 ], "showed": [ 220 ], "61": [ 221 ], "sensitive": [ 225, 234 ], "climate": [ 227, 261 ], "variables,": [ 228 ], "40": [ 230 ], "stressors.": [ 237 ], "study": [ 243 ], "can": [ 244 ], "be": [ 245 ], "derive": [ 248 ], "critical": [ 249 ], "information": [ 250 ], "regarding": [ 251 ], "habitat": [ 252, 264 ], "protection": [ 253 ], "priorities,": [ 254 ], "threats,": [ 256 ], "potential": [ 258 ], "effects": [ 259 ], "change": [ 262 ], "on": [ 263 ], "suitability,": [ 265 ], "aiding": [ 266 ], "efforts": [ 268 ], "conserve": [ 270 ], "fishes": [ 272 ], "now": [ 273 ], "into": [ 275 ], "future.": [ 277 ] }, "apc_list": null, "apc_paid": null, "authorships": [ { "author_position": "first", "author": { "id": "https://openalex.org/A5049858891", "display_name": "H.X. YU", "orcid": "https://orcid.org/0000-0003-0775-9346" }, "institutions": [], "countries": [], "is_corresponding": false, "raw_author_name": "Hao Yu", "raw_affiliation_strings": [], "affiliations": [] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5010631790", "display_name": "Arthur R. Cooper", "orcid": "https://orcid.org/0000-0002-0557-8560" }, "institutions": [], "countries": [], "is_corresponding": false, "raw_author_name": "None Arthur R. Cooper", "raw_affiliation_strings": [], "affiliations": [] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5077416114", "display_name": "Jared Ross", "orcid": "https://orcid.org/0000-0002-0582-3589" }, "institutions": [], "countries": [], "is_corresponding": false, "raw_author_name": "Jared Ross", "raw_affiliation_strings": [], "affiliations": [] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5059966811", "display_name": "Alexa J. McKerrow", "orcid": "https://orcid.org/0000-0002-8312-2905" }, "institutions": [], "countries": [], "is_corresponding": false, "raw_author_name": "Alexa McKerrow", "raw_affiliation_strings": [], "affiliations": [] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5079453977", "display_name": "Daniel J. Wieferich", "orcid": "https://orcid.org/0000-0003-1554-7992" }, "institutions": [], "countries": [], "is_corresponding": false, "raw_author_name": "Daniel J. Wieferich", "raw_affiliation_strings": [], "affiliations": [] }, { "author_position": "last", "author": { "id": "https://openalex.org/A5002092560", "display_name": "Dana M. Infante", "orcid": "https://orcid.org/0000-0003-1385-1587" }, "institutions": [], "countries": [], "is_corresponding": false, "raw_author_name": "Dana M. Infante", "raw_affiliation_strings": [], "affiliations": [] } ], "best_oa_location": { "is_oa": true, "landing_page_url": "https://doi.org/10.3133/sir20235088", "pdf_url": "https://pubs.usgs.gov/sir/2023/5088/sir20235088.pdf", "source": { "id": "https://openalex.org/S2764832999", "display_name": "Scientific investigations report", "issn_l": "2328-0328", "issn": [ "2328-0328", "2328-031X", "2332-5607" ], "is_oa": false, "is_in_doaj": false, "is_core": false, "host_organization": "https://openalex.org/P4310319934", "host_organization_name": "United States Geological Survey", "host_organization_lineage": [ "https://openalex.org/P4310319934", "https://openalex.org/P4310316088" ], "host_organization_lineage_names": [ "United States Geological Survey", "United States Department of the Interior" ], "type": "journal" }, "license": null, "license_id": null, "version": "publishedVersion", "is_accepted": true, "is_published": true }, "biblio": { "volume": null, "issue": null, "first_page": null, "last_page": null }, "citation_normalized_percentile": null, "cited_by_api_url": "https://api.openalex.org/works?filter=cites:W4388642278", "cited_by_count": 0, "cited_by_percentile_year": { "min": 0, "max": 74 }, "concepts": [ { "id": "https://openalex.org/C39432304", "wikidata": "https://www.wikidata.org/wiki/Q188847", "display_name": "Environmental science", "level": 0, "score": 0.5683358 }, { "id": "https://openalex.org/C112959462", "wikidata": "https://www.wikidata.org/wiki/Q1434465", "display_name": "Fluvial", "level": 3, "score": 0.5166045 }, { "id": "https://openalex.org/C76886044", "wikidata": "https://www.wikidata.org/wiki/Q2883300", "display_name": "Hydrology (agriculture)", "level": 2, "score": 0.47956842 }, { "id": "https://openalex.org/C74256435", "wikidata": "https://www.wikidata.org/wiki/Q134052", "display_name": "Flood myth", "level": 2, "score": 0.46762377 }, { "id": "https://openalex.org/C126645576", "wikidata": "https://www.wikidata.org/wiki/Q166620", "display_name": "Drainage basin", "level": 2, "score": 0.4572101 }, { "id": "https://openalex.org/C132124917", "wikidata": "https://www.wikidata.org/wiki/Q4257161", "display_name": "Species distribution", "level": 3, "score": 0.43423238 }, { "id": "https://openalex.org/C205649164", "wikidata": "https://www.wikidata.org/wiki/Q1071", "display_name": "Geography", "level": 0, "score": 0.4043014 }, { "id": "https://openalex.org/C18903297", "wikidata": "https://www.wikidata.org/wiki/Q7150", "display_name": "Ecology", "level": 1, "score": 0.3777913 }, { "id": "https://openalex.org/C185933670", "wikidata": "https://www.wikidata.org/wiki/Q52105", "display_name": "Habitat", "level": 2, "score": 0.32843184 }, { "id": "https://openalex.org/C100970517", "wikidata": "https://www.wikidata.org/wiki/Q52107", "display_name": "Physical geography", "level": 1, "score": 0.32794905 }, { "id": "https://openalex.org/C86803240", "wikidata": "https://www.wikidata.org/wiki/Q420", "display_name": "Biology", "level": 0, "score": 0.20420128 }, { "id": "https://openalex.org/C58640448", "wikidata": "https://www.wikidata.org/wiki/Q42515", "display_name": "Cartography", "level": 1, "score": 0.15407509 }, { "id": "https://openalex.org/C109007969", "wikidata": "https://www.wikidata.org/wiki/Q749565", "display_name": "Structural basin", "level": 2, "score": 0.14289314 }, { "id": "https://openalex.org/C127313418", "wikidata": "https://www.wikidata.org/wiki/Q1069", "display_name": "Geology", "level": 0, "score": 0.12914017 }, { "id": "https://openalex.org/C187320778", "wikidata": "https://www.wikidata.org/wiki/Q1349130", "display_name": "Geotechnical engineering", "level": 1, "score": 0.0 }, { "id": "https://openalex.org/C166957645", "wikidata": "https://www.wikidata.org/wiki/Q23498", "display_name": "Archaeology", "level": 1, "score": 0.0 }, { "id": "https://openalex.org/C151730666", "wikidata": "https://www.wikidata.org/wiki/Q7205", "display_name": "Paleontology", "level": 1, "score": 0.0 } ], "corresponding_author_ids": [], "corresponding_institution_ids": [], "countries_distinct_count": 0, "counts_by_year": [], "created_date": "2023-11-14", "datasets": [], "display_name": "Developing fluvial fish species distribution models across the conterminous United States\u2014A framework for management and conservation", "doi": "https://doi.org/10.3133/sir20235088", "fulltext_origin": "pdf", "fwci": 0.0, "grants": [], "has_fulltext": true, "id": "https://openalex.org/W4388642278", "ids": { "openalex": "https://openalex.org/W4388642278", "doi": "https://doi.org/10.3133/sir20235088" }, "indexed_in": [ "crossref" ], "institutions_distinct_count": 0, "is_paratext": false, "is_retracted": false, "keywords": [ { "id": "https://openalex.org/keywords/species-distribution-modeling", "display_name": "Species Distribution Modeling", "score": 0.522541 }, { "id": "https://openalex.org/keywords/species-distribution", "display_name": "Species distribution", "score": 0.43423238 } ], "language": "en", "locations": [ { "is_oa": true, "landing_page_url": "https://doi.org/10.3133/sir20235088", "pdf_url": "https://pubs.usgs.gov/sir/2023/5088/sir20235088.pdf", "source": { "id": "https://openalex.org/S2764832999", "display_name": "Scientific investigations report", "issn_l": "2328-0328", "issn": [ "2328-0328", "2328-031X", "2332-5607" ], "is_oa": false, "is_in_doaj": false, "is_core": false, "host_organization": "https://openalex.org/P4310319934", "host_organization_name": "United States Geological Survey", "host_organization_lineage": [ "https://openalex.org/P4310319934", "https://openalex.org/P4310316088" ], "host_organization_lineage_names": [ "United States Geological Survey", "United States Department of the Interior" ], "type": "journal" }, "license": null, "license_id": null, "version": "publishedVersion", "is_accepted": true, "is_published": true } ], "locations_count": 1, "mesh": [], "ngrams_url": "https://api.openalex.org/works/W4388642278/ngrams", "open_access": { "is_oa": true, "oa_status": "bronze", "oa_url": "https://pubs.usgs.gov/sir/2023/5088/sir20235088.pdf", "any_repository_has_fulltext": false }, "primary_location": { "is_oa": true, "landing_page_url": "https://doi.org/10.3133/sir20235088", "pdf_url": "https://pubs.usgs.gov/sir/2023/5088/sir20235088.pdf", "source": { "id": "https://openalex.org/S2764832999", "display_name": "Scientific investigations report", "issn_l": "2328-0328", "issn": [ "2328-0328", "2328-031X", "2332-5607" ], "is_oa": false, "is_in_doaj": false, "is_core": false, "host_organization": "https://openalex.org/P4310319934", "host_organization_name": "United States Geological Survey", "host_organization_lineage": [ "https://openalex.org/P4310319934", "https://openalex.org/P4310316088" ], "host_organization_lineage_names": [ "United States Geological Survey", "United States Department of the Interior" ], "type": "journal" }, "license": null, "license_id": null, "version": "publishedVersion", "is_accepted": true, "is_published": true }, "primary_topic": { "id": "https://openalex.org/T10895", "display_name": "Species Distribution Modeling and Climate Change Impacts", "score": 0.9989, "subfield": { "id": "https://openalex.org/subfields/2302", "display_name": "Ecological Modeling" }, "field": { "id": "https://openalex.org/fields/23", "display_name": "Environmental Science" }, "domain": { "id": "https://openalex.org/domains/3", "display_name": "Physical Sciences" } }, "publication_date": "2023-01-01", "publication_year": 2023, "referenced_works": [ "https://openalex.org/W1541774929", "https://openalex.org/W1990748933", "https://openalex.org/W2063616696", "https://openalex.org/W2101509327", "https://openalex.org/W2115268776", "https://openalex.org/W2120160157", "https://openalex.org/W2125360150", "https://openalex.org/W2135695572", "https://openalex.org/W2151594265", "https://openalex.org/W2590291326", "https://openalex.org/W2787894218", "https://openalex.org/W2946610311", "https://openalex.org/W3044254516" ], "referenced_works_count": 13, "related_works": [ "https://openalex.org/W4388314528", "https://openalex.org/W4256115524", "https://openalex.org/W4253805968", "https://openalex.org/W3007869563", "https://openalex.org/W2742025806", "https://openalex.org/W2391090996", "https://openalex.org/W2388449908", "https://openalex.org/W2344332614", "https://openalex.org/W2085300286", "https://openalex.org/W166202855" ], "sustainable_development_goals": [ { "id": "https://metadata.un.org/sdg/15", "display_name": "Life on land", "score": 0.4 } ], "title": "Developing fluvial fish species distribution models across the conterminous United States\u2014A framework for management and conservation", "topics": [ { "id": "https://openalex.org/T10895", "display_name": "Species Distribution Modeling and Climate Change Impacts", "score": 0.9989, "subfield": { "id": "https://openalex.org/subfields/2302", "display_name": "Ecological Modeling" }, "field": { "id": "https://openalex.org/fields/23", "display_name": "Environmental Science" }, "domain": { "id": "https://openalex.org/domains/3", "display_name": "Physical Sciences" } }, { "id": "https://openalex.org/T10302", "display_name": "Importance and Conservation of Freshwater Biodiversity", "score": 0.9986, "subfield": { "id": "https://openalex.org/subfields/2309", "display_name": "Nature and Landscape Conservation" }, "field": { "id": "https://openalex.org/fields/23", "display_name": "Environmental Science" }, "domain": { "id": "https://openalex.org/domains/3", "display_name": "Physical Sciences" } }, { "id": "https://openalex.org/T13398", "display_name": "Statistical Computing and Data Analysis in R", "score": 0.9799, "subfield": { "id": "https://openalex.org/subfields/1702", "display_name": "Artificial Intelligence" }, "field": { "id": "https://openalex.org/fields/17", "display_name": "Computer Science" }, "domain": { "id": "https://openalex.org/domains/3", "display_name": "Physical Sciences" } } ], "type": "article", "type_crossref": "journal-article", "updated_date": "2024-08-10T05:38:03.683530", "versions": [] }
}