Item talk:Q267510
From geokb
{
"USGS Publications Warehouse": { "@context": "https://schema.org", "@type": "Article", "additionalType": "Journal Article", "name": "Chytrid infections exhibit historical spread and contemporary seasonality in a declining stream-breeding frog", "identifier": [ { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse IndexID", "value": "70251529", "url": "https://pubs.usgs.gov/publication/70251529" }, { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse Internal ID", "value": 70251529 }, { "@type": "PropertyValue", "propertyID": "DOI", "value": "10.1098/rsos.231270", "url": "https://doi.org/10.1098/rsos.231270" } ], "journal": { "@type": "Periodical", "name": "Royal Society Open Science", "volumeNumber": "11", "issueNumber": "1" }, "inLanguage": "en", "isPartOf": [ { "@type": "CreativeWorkSeries", "name": "Royal Society Open Science" } ], "datePublished": "2024", "dateModified": "2024-02-14", "abstract": "Species with extensive geographical ranges pose special challenges to assessing drivers of wildlife disease, necessitating collaborative and large-scale analyses. The imperilled foothill yellow-legged frog (Rana boylii) inhabits a wide geographical range and variable conditions in rivers of California and Oregon (USA), and is considered threatened by the pathogen\u00a0Batrachochytrium dendrobatidis\u00a0(Bd). To assess drivers of Bd infections over time and space, we compiled over 2000 datapoints from\u00a0R. boylii\u00a0museum specimens (collected 1897\u20132005) and field samples (2005\u20132021) spanning 9\u00b0 of latitude. We observed a south-to-north spread of Bd detections beginning in the 1940s and increase in prevalence from the 1940s to 1970s, coinciding with extirpation from southern latitudes. We detected eight high-prevalence geographical clusters through time that span the species' geographical range. Field-sampled male\u00a0R. boylii\u00a0exhibited the highest prevalence, and juveniles sampled in autumn exhibited the highest loads. Bd infection risk was highest in lower elevation rain-dominated watersheds, and with cool temperatures and low stream-flow conditions at the end of the dry season. Through a holistic assessment of relationships between infection risk, geographical context and time, we identify the locations and time periods where Bd mitigation and monitoring will be critical for conservation of this imperilled species.", "description": "231270, 16 p.", "publisher": { "@type": "Organization", "name": "The Royal Society Publishing" }, "author": [ { "@type": "Person", "name": "Koo, M.S.", "givenName": "M.S.", "familyName": "Koo", "affiliation": [ { "@type": "Organization", "name": "UC Berkley" } ] }, { "@type": "Person", "name": "Russell, I.D.", "givenName": "I.D.", "familyName": "Russell", "affiliation": [ { "@type": "Organization", "name": "UC Santa Barbara" } ] }, { "@type": "Person", "name": "Vredenburg, V.", "givenName": "V.", "familyName": "Vredenburg", "affiliation": [ { "@type": "Organization", "name": "San Francisco State University" } ] }, { "@type": "Person", "name": "Westphal, M.", "givenName": "M.", "familyName": "Westphal", "affiliation": [ { "@type": "Organization", "name": "BLM" } ] }, { "@type": "Person", "name": "Wiseman, K.", "givenName": "K.", "familyName": "Wiseman", "affiliation": [ { "@type": "Organization", "name": "Cal Academy of Sciences" } ] }, { "@type": "Person", "name": "Belasen, A.M.", "givenName": "A.M.", "familyName": "Belasen", "affiliation": [ { "@type": "Organization", "name": "University of Texas at Austin; Cornell University" } ] }, { "@type": "Person", "name": "Peek, R.A.", "givenName": "R.A.", "familyName": "Peek", "affiliation": [ { "@type": "Organization", "name": "cdfw" } ] }, { "@type": "Person", "name": "Adams, A.J.", "givenName": "A.J.", "familyName": "Adams", "affiliation": [ { "@type": "Organization", "name": "Earth Research Institute" } ] }, { "@type": "Person", "name": "De Le\u00f3n, M.E.", "givenName": "M.E.", "familyName": "De Le\u00f3n", "affiliation": [ { "@type": "Organization", "name": "UC Davis" } ] }, { "@type": "Person", "name": "Dillingham, C.P.", "givenName": "C.P.", "familyName": "Dillingham", "affiliation": [ { "@type": "Organization", "name": "U.S.D.A. Forest Service" } ] }, { "@type": "Person", "name": "Grear, Daniel A. dgrear@usgs.gov", "givenName": "Daniel A.", "familyName": "Grear", "email": "dgrear@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0002-5478-1549", "url": "https://orcid.org/0000-0002-5478-1549" }, "affiliation": [ { "@type": "Organization", "name": "National Wildlife Health Center", "url": "https://www.usgs.gov/centers/nwhc" } ] }, { "@type": "Person", "name": "Halstead, Brian J. bhalstead@usgs.gov", "givenName": "Brian J.", "familyName": "Halstead", "email": "bhalstead@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0002-5535-6528", "url": "https://orcid.org/0000-0002-5535-6528" }, "affiliation": [ { "@type": "Organization", "name": "Western Ecological Research Center", "url": "https://www.usgs.gov/centers/werc" }, { "@type": "Organization", "name": "Coop Res Unit Seattle", "url": "https://www1.usgs.gov/coopunits/unit/Washington" } ] }, { "@type": "Person", "name": "Johnson, P.G.", "givenName": "P.G.", "familyName": "Johnson", "affiliation": [ { "@type": "Organization", "name": "NPS" } ] }, { "@type": "Person", "name": "Kleeman, Patrick M. pkleeman@usgs.gov", "givenName": "Patrick M.", "familyName": "Kleeman", "email": "pkleeman@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0001-6567-3239", "url": "https://orcid.org/0000-0001-6567-3239" }, "affiliation": [ { "@type": "Organization", "name": "Western Ecological Research Center", "url": "https://www.usgs.gov/centers/werc" } ] }, { "@type": "Person", "name": "Koppl, C.W.", "givenName": "C.W.", "familyName": "Koppl", "affiliation": [ { "@type": "Organization", "name": "USDA Forest Service" } ] }, { "@type": "Person", "name": "Lauder, J.D.", "givenName": "J.D.", "familyName": "Lauder", "affiliation": [ { "@type": "Organization", "name": "Sierra Streams Institute" } ] }, { "@type": "Person", "name": "Pope, K.L.", "givenName": "K.L.", "familyName": "Pope", "affiliation": [ { "@type": "Organization", "name": "USDA Forest Service" } ] }, { "@type": "Person", "name": "Kupferberg, S.J.", "givenName": "S.J.", "familyName": "Kupferberg", "affiliation": [ { "@type": "Organization", "name": "UC Berkley" } ] }, { "@type": "Person", "name": "Piovia-Scott, J.", "givenName": "J.", "familyName": "Piovia-Scott", "affiliation": [ { "@type": "Organization", "name": "Washington State University" } ] }, { "@type": "Person", "name": "Adams, Michael J.", "givenName": "Michael J.", "familyName": "Adams", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0001-8844-042X", "url": "https://orcid.org/0000-0001-8844-042X" }, "affiliation": [ { "@type": "Organization", "name": "Forest and Rangeland Ecosystem Science Center", "url": "https://www.usgs.gov/centers/forest-and-rangeland-ecosystem-science-center" } ] }, { "@type": "Person", "name": "Bettaso, J.", "givenName": "J.", "familyName": "Bettaso", "affiliation": [ { "@type": "Organization", "name": "USDA Forest Service" } ] }, { "@type": "Person", "name": "Breedveld, K.G.H.", "givenName": "K.G.H.", "familyName": "Breedveld", "affiliation": [ { "@type": "Organization", "name": "Spring Rivers Ecological Sciences LLC" } ] }, { "@type": "Person", "name": "Catenazzi, A.", "givenName": "A.", "familyName": "Catenazzi", "affiliation": [ { "@type": "Organization", "name": "Florida International University" } ] }, { "@type": "Person", "name": "Padgett-Flohr, G.", "givenName": "G.", "familyName": "Padgett-Flohr", "affiliation": [ { "@type": "Organization", "name": "ICF" } ] } ], "funder": [ { "@type": "Organization", "name": "National Wildlife Health Center", "url": "https://www.usgs.gov/centers/nwhc" }, { "@type": "Organization", "name": "Western Ecological Research Center", "url": "https://www.usgs.gov/centers/werc" } ], "spatialCoverage": [ { "@type": "Place", "additionalType": "country", "name": "United States", "url": "https://geonames.org/4074035" }, { "@type": "Place", "additionalType": "state", "name": "California" } ] }, "OpenAlex": { "_id": "https://openalex.org/w4391517729", "abstract_inverted_index": { "Species": [ 0 ], "with": [ 1, 105, 152 ], "extensive": [ 2 ], "geographical": [ 3, 31, 114, 122, 175 ], "ranges": [ 4 ], "pose": [ 5 ], "special": [ 6 ], "challenges": [ 7 ], "to": [ 8, 102 ], "assessing": [ 9 ], "drivers": [ 10, 55 ], "of": [ 11, 38, 56, 81, 88, 162, 170, 196 ], "wildlife": [ 12 ], "disease,": [ 13 ], "necessitating": [ 14 ], "collaborative": [ 15 ], "and": [ 16, 33, 40, 43, 61, 75, 95, 132, 151, 155, 177, 183, 189 ], "large-scale": [ 17 ], "analyses.": [ 18 ], "The": [ 19 ], "imperilled": [ 20, 198 ], "foothill": [ 21 ], "yellow-legged": [ 22 ], "frog": [ 23 ], "(": [ 24 ], "Rana": [ 25 ], "boylii": [ 26, 70, 127 ], ")": [ 27 ], "inhabits": [ 28 ], "a": [ 29, 85, 167 ], "wide": [ 30 ], "range": [ 32 ], "variable": [ 34 ], "conditions": [ 35, 158 ], "in": [ 36, 92, 97, 135, 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Belasen", "raw_affiliation_strings": [ "Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY, USA", "Department of Integrative Biology, University of Texas at Austin, Austin, TX, USA" ], "affiliations": [ { "raw_affiliation_string": "Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY, USA", "institution_ids": [ "https://openalex.org/I205783295" ] }, { "raw_affiliation_string": "Department of Integrative Biology, University of Texas at Austin, Austin, TX, USA", "institution_ids": [ "https://openalex.org/I86519309" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5025964843", "display_name": "Ryan A. Peek", "orcid": "https://orcid.org/0000-0002-9577-6885" }, "institutions": [ { "id": "https://openalex.org/I1333577951", "display_name": "California Department of Fish and Wildlife", "ror": "https://ror.org/02v6w2r95", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1333577951", "https://openalex.org/I2801479539", "https://openalex.org/I4389425283" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "R. A. Peek", "raw_affiliation_strings": [ "California Department of Fish and Wildlife, West Sacramento, CA, USA" ], "affiliations": [ { "raw_affiliation_string": "California Department of Fish and Wildlife, West Sacramento, CA, USA", "institution_ids": [ "https://openalex.org/I1333577951" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5028328858", "display_name": "AJ Adams", "orcid": "https://orcid.org/0000-0001-5609-6150" }, "institutions": [ { "id": "https://openalex.org/I154570441", "display_name": "University of California, Santa Barbara", "ror": "https://ror.org/02t274463", "country_code": "US", "type": "education", "lineage": [ "https://openalex.org/I154570441" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "A. J. Adams", "raw_affiliation_strings": [ "Earth Research Institute, University of California, Santa Barbara, CA, USA" ], "affiliations": [ { "raw_affiliation_string": "Earth Research Institute, University of California, Santa Barbara, CA, USA", "institution_ids": [ "https://openalex.org/I154570441" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5017375048", "display_name": "Imani D. Russell", "orcid": "https://orcid.org/0000-0001-7693-0501" }, "institutions": [ { "id": "https://openalex.org/I154570441", "display_name": "University of California, Santa Barbara", "ror": "https://ror.org/02t274463", "country_code": "US", "type": "education", "lineage": [ "https://openalex.org/I154570441" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "I. D. Russell", "raw_affiliation_strings": [ "Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA, USA" ], "affiliations": [ { "raw_affiliation_string": "Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA, USA", "institution_ids": [ "https://openalex.org/I154570441" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5025262103", "display_name": "Marina E. De Le\u00f3n", "orcid": "https://orcid.org/0000-0001-9973-1951" }, "institutions": [ { "id": "https://openalex.org/I84218800", "display_name": "University of California, Davis", "ror": "https://ror.org/05rrcem69", "country_code": "US", "type": "education", "lineage": [ "https://openalex.org/I84218800" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "M. E. De Le\u00f3n", "raw_affiliation_strings": [ "Genome Center, University of California, Davis, CA, USA" ], "affiliations": [ { "raw_affiliation_string": "Genome Center, University of California, Davis, CA, USA", "institution_ids": [ "https://openalex.org/I84218800" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5004149416", "display_name": "Michael J. Adams", "orcid": "https://orcid.org/0000-0001-8844-042X" }, "institutions": [ { "id": "https://openalex.org/I1286329397", "display_name": "United States Geological Survey", "ror": "https://ror.org/035a68863", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1286329397", "https://openalex.org/I1335927249" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "M. J. Adams", "raw_affiliation_strings": [ "U.S. Geological Survey, Forest and Rangeland Ecosystem Science Center, Corvallis, OR, USA" ], "affiliations": [ { "raw_affiliation_string": "U.S. Geological Survey, Forest and Rangeland Ecosystem Science Center, Corvallis, OR, USA", "institution_ids": [ "https://openalex.org/I1286329397" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5004511122", "display_name": "James B. Bettaso", "orcid": null }, "institutions": [ { "id": "https://openalex.org/I1313416372", "display_name": "US Forest Service", "ror": "https://ror.org/03zmjc935", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1313416372", "https://openalex.org/I1336096307" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "J. Bettaso", "raw_affiliation_strings": [ "Six Rivers National Forest, Lower Trinity Ranger District, USDA Forest Service, P.O. Box 68, Willow Creek, CA, USA" ], "affiliations": [ { "raw_affiliation_string": "Six Rivers National Forest, Lower Trinity Ranger District, USDA Forest Service, P.O. Box 68, Willow Creek, CA, USA", "institution_ids": [ "https://openalex.org/I1313416372" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5029999639", "display_name": "K. G. H. Breedveld", "orcid": "https://orcid.org/0009-0003-8572-1412" }, "institutions": [], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "K. G. H. Breedveld", "raw_affiliation_strings": [ "Spring Rivers Ecological Sciences LLC, Cassel, CA, USA" ], "affiliations": [ { "raw_affiliation_string": "Spring Rivers Ecological Sciences LLC, Cassel, CA, USA", "institution_ids": [] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5089643195", "display_name": "Alessandro Catenazzi", "orcid": "https://orcid.org/0000-0002-3650-4783" }, "institutions": [ { "id": "https://openalex.org/I19700959", "display_name": "Florida International University", "ror": "https://ror.org/02gz6gg07", "country_code": "US", "type": "education", "lineage": [ "https://openalex.org/I19700959" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "A. Catenazzi", "raw_affiliation_strings": [ "Department of Biological Sciences, Florida International University, Miami, FL, USA" ], "affiliations": [ { "raw_affiliation_string": "Department of Biological Sciences, Florida International University, Miami, FL, USA", "institution_ids": [ "https://openalex.org/I19700959" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5061339016", "display_name": "Colin P. Dillingham", "orcid": "https://orcid.org/0000-0002-4491-2680" }, "institutions": [ { "id": "https://openalex.org/I1313416372", "display_name": "US Forest Service", "ror": "https://ror.org/03zmjc935", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1313416372", "https://openalex.org/I1336096307" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "C. P. Dillingham", "raw_affiliation_strings": [ "Plumas National Forest, USDA Forest Service, Quincy, CA, USA" ], "affiliations": [ { "raw_affiliation_string": "Plumas National Forest, USDA Forest Service, Quincy, CA, USA", "institution_ids": [ "https://openalex.org/I1313416372" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5029018491", "display_name": "Daniel A. Grear", "orcid": "https://orcid.org/0000-0002-5478-1549" }, "institutions": [ { "id": "https://openalex.org/I1286329397", "display_name": "United States Geological Survey", "ror": "https://ror.org/035a68863", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1286329397", "https://openalex.org/I1335927249" ] }, { "id": "https://openalex.org/I4210131920", "display_name": "National Wildlife Health Center", "ror": "https://ror.org/038d10y34", "country_code": "US", "type": "healthcare", "lineage": [ "https://openalex.org/I1286329397", "https://openalex.org/I1335927249", "https://openalex.org/I4210131920" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "D. A. Grear", "raw_affiliation_strings": [ "U.S. Geological Survey, National Wildlife Health Center, Madison, WI, USA" ], "affiliations": [ { "raw_affiliation_string": "U.S. Geological Survey, National Wildlife Health Center, Madison, WI, USA", "institution_ids": [ "https://openalex.org/I1286329397", "https://openalex.org/I4210131920" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5054173770", "display_name": "Brian J. Halstead", "orcid": "https://orcid.org/0000-0002-5535-6528" }, "institutions": [ { "id": "https://openalex.org/I4210143030", "display_name": "Bear Valley", "ror": "https://ror.org/03gy9dj46", "country_code": "US", "type": "healthcare", "lineage": [ "https://openalex.org/I4210143030" ] }, { "id": "https://openalex.org/I4210092499", "display_name": "Center Point", "ror": "https://ror.org/002eet613", "country_code": "US", "type": "other", "lineage": [ "https://openalex.org/I4210092499" ] }, { "id": "https://openalex.org/I1286329397", "display_name": "United States Geological Survey", "ror": "https://ror.org/035a68863", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1286329397", "https://openalex.org/I1335927249" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "B. J. 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