Item talk:Q261561
From geokb
{
"USGS Publications Warehouse": {
"@context": "https://schema.org",
"@type": "Article",
"additionalType": "Journal Article",
"name": "Mussel mass mortality and the microbiome: Evidence for shifts in the bacterial microbiome of a declining freshwater bivalve",
"identifier": [
{
"@type": "PropertyValue",
"propertyID": "USGS Publications Warehouse IndexID",
"value": "70224538",
"url": "https://pubs.usgs.gov/publication/70224538"
},
{
"@type": "PropertyValue",
"propertyID": "USGS Publications Warehouse Internal ID",
"value": 70224538
},
{
"@type": "PropertyValue",
"propertyID": "DOI",
"value": "10.3390/microorganisms9091976",
"url": "https://doi.org/10.3390/microorganisms9091976"
}
],
"journal": {
"@type": "Periodical",
"name": "Microorganisms",
"volumeNumber": "9",
"issueNumber": "9"
},
"inLanguage": "en",
"isPartOf": [
{
"@type": "CreativeWorkSeries",
"name": "Microorganisms"
}
],
"datePublished": "2021",
"dateModified": "2022-01-24",
"abstract": "Freshwater mussels (Unionida) are suffering mass mortality events worldwide, but the causes remain enigmatic. Here, we describe an analysis of bacterial loads, community structure, and inferred metabolic pathways in the hemolymph of pheasantshells (Actinonaias pectorosa) from the Clinch River, USA, during a multi-year mass mortality event. Bacterial loads were approximately 2 logs higher in moribund mussels (cases) than in apparently healthy mussels (controls). Bacterial communities also differed between cases and controls, with fewer sequence variants (SVs) and higher relative abundances of the proteobacteria\u00a0Yokenella regensburgei\u00a0and\u00a0Aeromonas salmonicida\u00a0in cases than in controls. Inferred bacterial metabolic pathways demonstrated a predominance of degradation, utilization, and assimilation pathways in cases and a predominance of biosynthesis pathways in controls. Only two SVs correlated with Clinch densovirus 1, a virus previously shown to be strongly associated with mortality in this system: Deinococcota and Actinobacteriota, which were associated with densovirus-positive and densovirus-negative mussels, respectively. Overall, our results suggest that bacterial invasion and shifts in the bacterial microbiome during unionid mass mortality events may result from primary insults such as viral infection or environmental stressors. If so, bacterial communities in mussel hemolymph may be sensitive, if generalized, indicators of declining mussel health.",
"description": "1976, 15 p.",
"publisher": {
"@type": "Organization",
"name": "MDPI"
},
"author": [
{
"@type": "Person",
"name": "Richard, Jordan",
"givenName": "Jordan",
"familyName": "Richard",
"affiliation": [
{
"@type": "Organization",
"name": "USFWS"
}
]
},
{
"@type": "Person",
"name": "Campbell, Lewis J.",
"givenName": "Lewis J.",
"familyName": "Campbell",
"identifier": {
"@type": "PropertyValue",
"propertyID": "ORCID",
"value": "0000-0002-7852-2250",
"url": "https://orcid.org/0000-0002-7852-2250"
}
},
{
"@type": "Person",
"name": "Leis, Eric",
"givenName": "Eric",
"familyName": "Leis"
},
{
"@type": "Person",
"name": "Agbalog, Rose",
"givenName": "Rose",
"familyName": "Agbalog",
"affiliation": [
{
"@type": "Organization",
"name": "USFWS-Virginia Field Office"
}
]
},
{
"@type": "Person",
"name": "Dunn, Christopher D.",
"givenName": "Christopher D.",
"familyName": "Dunn",
"affiliation": [
{
"@type": "Organization",
"name": "Department of Pathobiological Sciences, University of Wisconsin-Madison,"
}
]
},
{
"@type": "Person",
"name": "Waller, Diane L. dwaller@usgs.gov",
"givenName": "Diane L.",
"familyName": "Waller",
"email": "dwaller@usgs.gov",
"identifier": {
"@type": "PropertyValue",
"propertyID": "ORCID",
"value": "0000-0002-6104-810X",
"url": "https://orcid.org/0000-0002-6104-810X"
},
"affiliation": [
{
"@type": "Organization",
"name": "Upper Midwest Environmental Sciences Center",
"url": "https://www.usgs.gov/centers/upper-midwest-environmental-sciences-center"
}
]
},
{
"@type": "Person",
"name": "Knowles, Susan sknowles@usgs.gov",
"givenName": "Susan",
"familyName": "Knowles",
"email": "sknowles@usgs.gov",
"identifier": {
"@type": "PropertyValue",
"propertyID": "ORCID",
"value": "0000-0002-0254-6491",
"url": "https://orcid.org/0000-0002-0254-6491"
},
"affiliation": [
{
"@type": "Organization",
"name": "National Wildlife Health Center",
"url": "https://www.usgs.gov/centers/nwhc"
}
]
},
{
"@type": "Person",
"name": "Putnam, Joel G. jgputnam@usgs.gov",
"givenName": "Joel G.",
"familyName": "Putnam",
"email": "jgputnam@usgs.gov",
"identifier": {
"@type": "PropertyValue",
"propertyID": "ORCID",
"value": "0000-0002-5464-4587",
"url": "https://orcid.org/0000-0002-5464-4587"
},
"affiliation": [
{
"@type": "Organization",
"name": "Upper Midwest Environmental Sciences Center",
"url": "https://www.usgs.gov/centers/upper-midwest-environmental-sciences-center"
}
]
},
{
"@type": "Person",
"name": "Goldberg, Tony",
"givenName": "Tony",
"familyName": "Goldberg",
"affiliation": [
{
"@type": "Organization",
"name": "UW Madison"
}
]
}
],
"funder": [
{
"@type": "Organization",
"name": "National Wildlife Health Center",
"url": "https://www.usgs.gov/centers/nwhc"
},
{
"@type": "Organization",
"name": "Upper Midwest Environmental Sciences Center",
"url": "https://www.usgs.gov/centers/upper-midwest-environmental-sciences-center"
}
],
"spatialCoverage": [
{
"@type": "Place",
"additionalType": "country",
"name": "United States",
"url": "https://geonames.org/4074035"
},
{
"@type": "Place",
"additionalType": "state",
"name": "Tennessee"
},
{
"@type": "Place",
"additionalType": "state",
"name": "Virginia"
},
{
"@type": "Place",
"additionalType": "unknown",
"name": "Clinch River",
"url": "https://geonames.org/4614177"
},
{
"@type": "Place",
"geo": [
{
"@type": "GeoShape",
"additionalProperty": {
"@type": "PropertyValue",
"name": "GeoJSON",
"value": {
"type": "FeatureCollection",
"features": [
{
"type": "Feature",
"properties": {},
"geometry": {
"type": "Polygon",
"coordinates": [
[
[
-83.2489013671875,
36.416862115300304
],
[
-81.485595703125,
37.413800350662896
],
[
-82.177734375,
37.71859032558816
],
[
-84.44091796875,
36.43012234551576
],
[
-83.2489013671875,
36.416862115300304
]
]
]
}
}
]
}
}
},
{
"@type": "GeoCoordinates",
"latitude": 36.99927497060533,
"longitude": -82.85630632720711
}
]
}
]
},
"OpenAlex": {
"_id": "https://openalex.org/w3201649044",
"abstract_inverted_index": {
"Freshwater": [
0
],
"mussels": [
1,
55,
61
],
"(Unionida)": [
2
],
"are": [
3
],
"suffering": [
4
],
"mass": [
5,
43,
164
],
"mortality": [
6,
44,
133,
165
],
"events": [
7,
166
],
"worldwide,": [
8
],
"but": [
9
],
"the": [
10,
29,
36,
81,
159
],
"causes": [
11
],
"remain": [
12
],
"enigmatic.": [
13
],
"Here,": [
14
],
"we": [
15
],
"describe": [
16
],
"an": [
17
],
"analysis": [
18
],
"of": [
19,
31,
80,
100,
111,
192
],
"bacterial": [
20,
94,
154,
160,
181
],
"loads,": [
21
],
"community": [
22
],
"structure,": [
23
],
"and": [
24,
69,
76,
85,
103,
108,
138,
145,
156
],
"inferred": [
25
],
"metabolic": [
26,
95
],
"pathways": [
27,
96,
105,
113
],
"in": [
28,
53,
58,
88,
91,
106,
114,
134,
158,
183
],
"hemolymph": [
30,
185
],
"pheasantshells": [
32
],
"(Actinonaias": [
33
],
"pectorosa)": [
34
],
"from": [
35,
169
],
"Clinch": [
37,
121
],
"River,": [
38
],
"USA,": [
39
],
"during": [
40,
162
],
"a": [
41,
98,
109,
124
],
"multi-year": [
42
],
"event.": [
45
],
"Bacterial": [
46,
63
],
"loads": [
47
],
"were": [
48,
141
],
"approximately": [
49
],
"2": [
50
],
"logs": [
51
],
"higher": [
52,
77
],
"moribund": [
54
],
"(cases)": [
56
],
"than": [
57,
90
],
"apparently": [
59
],
"healthy": [
60
],
"(controls).": [
62
],
"communities": [
64,
182
],
"also": [
65
],
"differed": [
66
],
"between": [
67
],
"cases": [
68,
89,
107
],
"controls,": [
70
],
"with": [
71,
120,
132,
143
],
"fewer": [
72
],
"sequence": [
73
],
"variants": [
74
],
"(SVs)": [
75
],
"relative": [
78
],
"abundances": [
79
],
"proteobacteria": [
82
],
"Yokenella": [
83
],
"regensburgei": [
84
],
"Aeromonas": [
86
],
"salmonicida": [
87
],
"controls.": [
92,
115
],
"Inferred": [
93
],
"demonstrated": [
97
],
"predominance": [
99,
110
],
"degradation,": [
101
],
"utilization,": [
102
],
"assimilation": [
104
],
"biosynthesis": [
112
],
"Only": [
116
],
"two": [
117
],
"SVs": [
118
],
"correlated": [
119
],
"densovirus": [
122
],
"1,": [
123
],
"virus": [
125
],
"previously": [
126
],
"shown": [
127
],
"to": [
128
],
"be": [
129,
187
],
"strongly": [
130
],
"associated": [
131,
142
],
"this": [
135
],
"system:": [
136
],
"Deinococcota": [
137
],
"Actinobacteriota,": [
139
],
"which": [
140
],
"densovirus-positive": [
144
],
"densovirus-negative": [
146
],
"mussels,": [
147
],
"respectively.": [
148
],
"Overall,": [
149
],
"our": [
150
],
"results": [
151
],
"suggest": [
152
],
"that": [
153
],
"invasion": [
155
],
"shifts": [
157
],
"microbiome": [
161
],
"unionid": [
163
],
"may": [
167,
186
],
"result": [
168
],
"primary": [
170
],
"insults": [
171
],
"such": [
172
],
"as": [
173
],
"viral": [
174
],
"infection": [
175
],
"or": [
176
],
"environmental": [
177
],
"stressors.": [
178
],
"If": [
179
],
"so,": [
180
],
"mussel": [
184,
194
],
"sensitive,": [
188
],
"if": [
189
],
"generalized,": [
190
],
"indicators": [
191
],
"declining": [
193
],
"health.": [
195
]
},
"apc_list": {
"value": 2200,
"currency": "CHF",
"value_usd": 2382,
"provenance": "doaj"
},
"apc_paid": {
"value": 2200,
"currency": "CHF",
"value_usd": 2382,
"provenance": "doaj"
},
"authorships": [
{
"author_position": "first",
"author": {
"id": "https://openalex.org/A5090128779",
"display_name": "Jordan C. Richard",
"orcid": "https://orcid.org/0000-0002-9981-7832"
},
"institutions": [
{
"id": "https://openalex.org/I135310074",
"display_name": "University of Wisconsin\u2013Madison",
"ror": "https://ror.org/01y2jtd41",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I135310074"
]
},
{
"id": "https://openalex.org/I1343028186",
"display_name": "United States Fish and Wildlife Service",
"ror": "https://ror.org/04k7dar27",
"country_code": "US",
"type": "government",
"lineage": [
"https://openalex.org/I1335927249",
"https://openalex.org/I1343028186"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Jordan C. Richard",
"raw_affiliation_strings": [
"Department of Pathobiological Sciences and Freshwater & Marine Sciences Program, University of Wisconsin-Madison, Madison, WI 53711, USA",
"Southwestern Virginia Field Office, US Fish and Wildlife Service, Abingdon, VA 24210, USA"
],
"affiliations": [
{
"raw_affiliation_string": "Department of Pathobiological Sciences and Freshwater & Marine Sciences Program, University of Wisconsin-Madison, Madison, WI 53711, USA",
"institution_ids": [
"https://openalex.org/I135310074"
]
},
{
"raw_affiliation_string": "Southwestern Virginia Field Office, US Fish and Wildlife Service, Abingdon, VA 24210, USA",
"institution_ids": [
"https://openalex.org/I1343028186"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5082304690",
"display_name": "Lewis J. Campbell",
"orcid": "https://orcid.org/0000-0002-7852-2250"
},
"institutions": [
{
"id": "https://openalex.org/I135310074",
"display_name": "University of Wisconsin\u2013Madison",
"ror": "https://ror.org/01y2jtd41",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I135310074"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Lewis J. Campbell",
"raw_affiliation_strings": [
"Department of Pathobiological Sciences and Freshwater & Marine Sciences Program, University of Wisconsin-Madison, Madison, WI 53711, USA"
],
"affiliations": [
{
"raw_affiliation_string": "Department of Pathobiological Sciences and Freshwater & Marine Sciences Program, University of Wisconsin-Madison, Madison, WI 53711, USA",
"institution_ids": [
"https://openalex.org/I135310074"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5024282530",
"display_name": "Eric Leis",
"orcid": "https://orcid.org/0000-0001-8379-3285"
},
"institutions": [
{
"id": "https://openalex.org/I1343028186",
"display_name": "United States Fish and Wildlife Service",
"ror": "https://ror.org/04k7dar27",
"country_code": "US",
"type": "government",
"lineage": [
"https://openalex.org/I1335927249",
"https://openalex.org/I1343028186"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Eric M. Leis",
"raw_affiliation_strings": [
"La Crosse Fish Health Center-Midwest Fisheries Center, US Fish and Wildlife Service, Onalaska, WI 54650, USA"
],
"affiliations": [
{
"raw_affiliation_string": "La Crosse Fish Health Center-Midwest Fisheries Center, US Fish and Wildlife Service, Onalaska, WI 54650, USA",
"institution_ids": [
"https://openalex.org/I1343028186"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5034889242",
"display_name": "Rose E. Agbalog",
"orcid": "https://orcid.org/0000-0003-0923-9782"
},
"institutions": [
{
"id": "https://openalex.org/I1343028186",
"display_name": "United States Fish and Wildlife Service",
"ror": "https://ror.org/04k7dar27",
"country_code": "US",
"type": "government",
"lineage": [
"https://openalex.org/I1335927249",
"https://openalex.org/I1343028186"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Rose E. Agbalog",
"raw_affiliation_strings": [
"Southwestern Virginia Field Office, US Fish and Wildlife Service, Abingdon, VA 24210, USA"
],
"affiliations": [
{
"raw_affiliation_string": "Southwestern Virginia Field Office, US Fish and Wildlife Service, Abingdon, VA 24210, USA",
"institution_ids": [
"https://openalex.org/I1343028186"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5024761692",
"display_name": "Christopher D. Dunn",
"orcid": "https://orcid.org/0000-0002-2820-5708"
},
"institutions": [
{
"id": "https://openalex.org/I135310074",
"display_name": "University of Wisconsin\u2013Madison",
"ror": "https://ror.org/01y2jtd41",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I135310074"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Chris D. Dunn",
"raw_affiliation_strings": [
"Department of Pathobiological Sciences and Freshwater & Marine Sciences Program, University of Wisconsin-Madison, Madison, WI 53711, USA"
],
"affiliations": [
{
"raw_affiliation_string": "Department of Pathobiological Sciences and Freshwater & Marine Sciences Program, University of Wisconsin-Madison, Madison, WI 53711, USA",
"institution_ids": [
"https://openalex.org/I135310074"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5069969648",
"display_name": "Diane L. Waller",
"orcid": "https://orcid.org/0000-0002-6104-810X"
},
"institutions": [
{
"id": "https://openalex.org/I1286329397",
"display_name": "United States Geological Survey",
"ror": "https://ror.org/035a68863",
"country_code": "US",
"type": "government",
"lineage": [
"https://openalex.org/I1286329397",
"https://openalex.org/I1335927249"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Diane L. Waller",
"raw_affiliation_strings": [
"Upper Midwest Environmental Sciences Center, U.S. Geological Survey, La Crosse, WI 54603, USA"
],
"affiliations": [
{
"raw_affiliation_string": "Upper Midwest Environmental Sciences Center, U.S. Geological Survey, La Crosse, WI 54603, USA",
"institution_ids": [
"https://openalex.org/I1286329397"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5053450083",
"display_name": "Susan Knowles",
"orcid": "https://orcid.org/0000-0002-0254-6491"
},
"institutions": [
{
"id": "https://openalex.org/I4210131920",
"display_name": "National Wildlife Health Center",
"ror": "https://ror.org/038d10y34",
"country_code": "US",
"type": "healthcare",
"lineage": [
"https://openalex.org/I1286329397",
"https://openalex.org/I1335927249",
"https://openalex.org/I4210131920"
]
},
{
"id": "https://openalex.org/I1286329397",
"display_name": "United States Geological Survey",
"ror": "https://ror.org/035a68863",
"country_code": "US",
"type": "government",
"lineage": [
"https://openalex.org/I1286329397",
"https://openalex.org/I1335927249"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Susan Knowles",
"raw_affiliation_strings": [
"National Wildlife Health Center, U.S. Geological Survey, Madison, WI 53711, USA"
],
"affiliations": [
{
"raw_affiliation_string": "National Wildlife Health Center, U.S. Geological Survey, Madison, WI 53711, USA",
"institution_ids": [
"https://openalex.org/I4210131920",
"https://openalex.org/I1286329397"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5065011202",
"display_name": "Joel Putnam",
"orcid": "https://orcid.org/0000-0002-5464-4587"
},
"institutions": [
{
"id": "https://openalex.org/I1286329397",
"display_name": "United States Geological Survey",
"ror": "https://ror.org/035a68863",
"country_code": "US",
"type": "government",
"lineage": [
"https://openalex.org/I1286329397",
"https://openalex.org/I1335927249"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Joel G. Putnam",
"raw_affiliation_strings": [
"Upper Midwest Environmental Sciences Center, U.S. Geological Survey, La Crosse, WI 54603, USA"
],
"affiliations": [
{
"raw_affiliation_string": "Upper Midwest Environmental Sciences Center, U.S. Geological Survey, La Crosse, WI 54603, USA",
"institution_ids": [
"https://openalex.org/I1286329397"
]
}
]
},
{
"author_position": "last",
"author": {
"id": "https://openalex.org/A5024025397",
"display_name": "Tony L. Goldberg",
"orcid": "https://orcid.org/0000-0003-3962-4913"
},
"institutions": [
{
"id": "https://openalex.org/I135310074",
"display_name": "University of Wisconsin\u2013Madison",
"ror": "https://ror.org/01y2jtd41",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I135310074"
]
}
],
"countries": [
"US"
],
"is_corresponding": true,
"raw_author_name": "Tony L. Goldberg",
"raw_affiliation_strings": [
"Department of Pathobiological Sciences and Freshwater & Marine Sciences Program, University of Wisconsin-Madison, Madison, WI 53711, USA"
],
"affiliations": [
{
"raw_affiliation_string": "Department of Pathobiological Sciences and Freshwater & Marine Sciences Program, University of Wisconsin-Madison, Madison, WI 53711, USA",
"institution_ids": [
"https://openalex.org/I135310074"
]
}
]
}
],
"best_oa_location": {
"is_oa": true,
"landing_page_url": "https://doi.org/10.3390/microorganisms9091976",
"pdf_url": "https://www.mdpi.com/2076-2607/9/9/1976/pdf?version=1632292244",
"source": {
"id": "https://openalex.org/S4210222090",
"display_name": "Microorganisms",
"issn_l": "2076-2607",
"issn": [
"2076-2607"
],
"is_oa": true,
"is_in_doaj": true,
"is_core": true,
"host_organization": "https://openalex.org/P4310310987",
"host_organization_name": "Multidisciplinary Digital Publishing Institute",
"host_organization_lineage": [
"https://openalex.org/P4310310987"
],
"host_organization_lineage_names": [
"Multidisciplinary Digital Publishing Institute"
],
"type": "journal"
},
"license": "cc-by",
"license_id": "https://openalex.org/licenses/cc-by",
"version": "publishedVersion",
"is_accepted": true,
"is_published": true
},
"biblio": {
"volume": "9",
"issue": "9",
"first_page": "1976",
"last_page": "1976"
},
"citation_normalized_percentile": {
"value": 0.751917,
"is_in_top_1_percent": false,
"is_in_top_10_percent": false
},
"cited_by_api_url": "https://api.openalex.org/works?filter=cites:W3201649044",
"cited_by_count": 24,
"cited_by_percentile_year": {
"min": 95,
"max": 96
},
"concepts": [
{
"id": "https://openalex.org/C86803240",
"wikidata": "https://www.wikidata.org/wiki/Q420",
"display_name": "Biology",
"level": 0,
"score": 0.8844594
},
{
"id": "https://openalex.org/C2779987062",
"wikidata": "https://www.wikidata.org/wiki/Q13042834",
"display_name": "Mussel",
"level": 2,
"score": 0.73231375
},
{
"id": "https://openalex.org/C143121216",
"wikidata": "https://www.wikidata.org/wiki/Q1330402",
"display_name": "Microbiome",
"level": 2,
"score": 0.73094475
},
{
"id": "https://openalex.org/C100068826",
"wikidata": "https://www.wikidata.org/wiki/Q485675",
"display_name": "Hemolymph",
"level": 2,
"score": 0.5564601
},
{
"id": "https://openalex.org/C90856448",
"wikidata": "https://www.wikidata.org/wiki/Q431",
"display_name": "Zoology",
"level": 1,
"score": 0.49653608
},
{
"id": "https://openalex.org/C15151743",
"wikidata": "https://www.wikidata.org/wiki/Q903778",
"display_name": "Metagenomics",
"level": 3,
"score": 0.47195068
},
{
"id": "https://openalex.org/C18903297",
"wikidata": "https://www.wikidata.org/wiki/Q7150",
"display_name": "Ecology",
"level": 1,
"score": 0.4603498
},
{
"id": "https://openalex.org/C2779676784",
"wikidata": "https://www.wikidata.org/wiki/Q130999",
"display_name": "Proteobacteria",
"level": 4,
"score": 0.4383395
},
{
"id": "https://openalex.org/C89423630",
"wikidata": "https://www.wikidata.org/wiki/Q7193",
"display_name": "Microbiology",
"level": 1,
"score": 0.40909493
},
{
"id": "https://openalex.org/C523546767",
"wikidata": "https://www.wikidata.org/wiki/Q10876",
"display_name": "Bacteria",
"level": 2,
"score": 0.24042156
},
{
"id": "https://openalex.org/C42062724",
"wikidata": "https://www.wikidata.org/wiki/Q1209205",
"display_name": "16S ribosomal RNA",
"level": 3,
"score": 0.16074261
},
{
"id": "https://openalex.org/C54355233",
"wikidata": "https://www.wikidata.org/wiki/Q7162",
"display_name": "Genetics",
"level": 1,
"score": 0.1461403
},
{
"id": "https://openalex.org/C104317684",
"wikidata": "https://www.wikidata.org/wiki/Q7187",
"display_name": "Gene",
"level": 2,
"score": 0.11009583
}
],
"corresponding_author_ids": [
"https://openalex.org/A5024025397"
],
"corresponding_institution_ids": [
"https://openalex.org/I135310074"
],
"countries_distinct_count": 1,
"counts_by_year": [
{
"year": 2024,
"cited_by_count": 9
},
{
"year": 2023,
"cited_by_count": 9
},
{
"year": 2022,
"cited_by_count": 6
}
],
"created_date": "2021-09-27",
"datasets": [],
"display_name": "Mussel Mass Mortality and the Microbiome: Evidence for Shifts in the Bacterial Microbiome of a Declining Freshwater Bivalve",
"doi": "https://doi.org/10.3390/microorganisms9091976",
"fwci": 3.312,
"grants": [
{
"funder": "https://openalex.org/F4320332182",
"funder_display_name": "U.S. Fish and Wildlife Service",
"award_id": "F20AC10617"
},
{
"funder": "https://openalex.org/F4320332183",
"funder_display_name": "U.S. Geological Survey",
"award_id": "Ecosystem Mission Area cyclical funds"
}
],
"has_fulltext": false,
"id": "https://openalex.org/W3201649044",
"ids": {
"openalex": "https://openalex.org/W3201649044",
"doi": "https://doi.org/10.3390/microorganisms9091976",
"mag": "3201649044",
"pmid": "https://pubmed.ncbi.nlm.nih.gov/34576872",
"pmcid": "https://www.ncbi.nlm.nih.gov/pmc/articles/8471132"
},
"indexed_in": [
"crossref",
"doaj"
],
"institutions_distinct_count": 4,
"is_paratext": false,
"is_retracted": false,
"keywords": [
{
"id": "https://openalex.org/keywords/freshwater-mussels",
"display_name": "Freshwater Mussels",
"score": 0.574573
},
{
"id": "https://openalex.org/keywords/hemolymph",
"display_name": "Hemolymph",
"score": 0.5564601
}
],
"language": "en",
"locations": [
{
"is_oa": true,
"landing_page_url": "https://doi.org/10.3390/microorganisms9091976",
"pdf_url": "https://www.mdpi.com/2076-2607/9/9/1976/pdf?version=1632292244",
"source": {
"id": "https://openalex.org/S4210222090",
"display_name": "Microorganisms",
"issn_l": "2076-2607",
"issn": [
"2076-2607"
],
"is_oa": true,
"is_in_doaj": true,
"is_core": true,
"host_organization": "https://openalex.org/P4310310987",
"host_organization_name": "Multidisciplinary Digital Publishing Institute",
"host_organization_lineage": [
"https://openalex.org/P4310310987"
],
"host_organization_lineage_names": [
"Multidisciplinary Digital Publishing Institute"
],
"type": "journal"
},
"license": "cc-by",
"license_id": "https://openalex.org/licenses/cc-by",
"version": "publishedVersion",
"is_accepted": true,
"is_published": true
},
{
"is_oa": false,
"landing_page_url": "https://doaj.org/article/fb6b70c9c72648128776e09eda221442",
"pdf_url": null,
"source": {
"id": "https://openalex.org/S4306401280",
"display_name": "DOAJ (DOAJ: Directory of Open Access Journals)",
"issn_l": null,
"issn": null,
"is_oa": true,
"is_in_doaj": false,
"is_core": false,
"host_organization": null,
"host_organization_name": null,
"host_organization_lineage": [],
"host_organization_lineage_names": [],
"type": "repository"
},
"license": null,
"license_id": null,
"version": null,
"is_accepted": false,
"is_published": false
},
{
"is_oa": true,
"landing_page_url": "https://europepmc.org/articles/pmc8471132",
"pdf_url": "https://europepmc.org/articles/pmc8471132?pdf=render",
"source": {
"id": "https://openalex.org/S4306400806",
"display_name": "Europe PMC (PubMed Central)",
"issn_l": null,
"issn": null,
"is_oa": true,
"is_in_doaj": false,
"is_core": false,
"host_organization": "https://openalex.org/I1303153112",
"host_organization_name": "European Bioinformatics Institute",
"host_organization_lineage": [
"https://openalex.org/I1303153112"
],
"host_organization_lineage_names": [
"European Bioinformatics Institute"
],
"type": "repository"
},
"license": "cc-by",
"license_id": "https://openalex.org/licenses/cc-by",
"version": "publishedVersion",
"is_accepted": true,
"is_published": true
},
{
"is_oa": true,
"landing_page_url": "https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8471132",
"pdf_url": null,
"source": {
"id": "https://openalex.org/S2764455111",
"display_name": "PubMed Central",
"issn_l": null,
"issn": null,
"is_oa": true,
"is_in_doaj": false,
"is_core": false,
"host_organization": "https://openalex.org/I1299303238",
"host_organization_name": "National Institutes of Health",
"host_organization_lineage": [
"https://openalex.org/I1299303238"
],
"host_organization_lineage_names": [
"National Institutes of Health"
],
"type": "repository"
},
"license": null,
"license_id": null,
"version": "publishedVersion",
"is_accepted": true,
"is_published": true
}
],
"locations_count": 4,
"mesh": [],
"ngrams_url": "https://api.openalex.org/works/W3201649044/ngrams",
"open_access": {
"is_oa": true,
"oa_status": "gold",
"oa_url": "https://www.mdpi.com/2076-2607/9/9/1976/pdf?version=1632292244",
"any_repository_has_fulltext": true
},
"primary_location": {
"is_oa": true,
"landing_page_url": "https://doi.org/10.3390/microorganisms9091976",
"pdf_url": "https://www.mdpi.com/2076-2607/9/9/1976/pdf?version=1632292244",
"source": {
"id": "https://openalex.org/S4210222090",
"display_name": "Microorganisms",
"issn_l": "2076-2607",
"issn": [
"2076-2607"
],
"is_oa": true,
"is_in_doaj": true,
"is_core": true,
"host_organization": "https://openalex.org/P4310310987",
"host_organization_name": "Multidisciplinary Digital Publishing Institute",
"host_organization_lineage": [
"https://openalex.org/P4310310987"
],
"host_organization_lineage_names": [
"Multidisciplinary Digital Publishing Institute"
],
"type": "journal"
},
"license": "cc-by",
"license_id": "https://openalex.org/licenses/cc-by",
"version": "publishedVersion",
"is_accepted": true,
"is_published": true
},
"primary_topic": {
"id": "https://openalex.org/T12097",
"display_name": "Ecological Impact of Freshwater Mussels",
"score": 0.9991,
"subfield": {
"id": "https://openalex.org/subfields/2303",
"display_name": "Ecology"
},
"field": {
"id": "https://openalex.org/fields/23",
"display_name": "Environmental Science"
},
"domain": {
"id": "https://openalex.org/domains/3",
"display_name": "Physical Sciences"
}
},
"publication_date": "2021-09-17",
"publication_year": 2021,
"referenced_works": [
"https://openalex.org/W1626273811",
"https://openalex.org/W1986428343",
"https://openalex.org/W2003923637",
"https://openalex.org/W2004629729",
"https://openalex.org/W2010563442",
"https://openalex.org/W2010623095",
"https://openalex.org/W2019343097",
"https://openalex.org/W2034285706",
"https://openalex.org/W2035068961",
"https://openalex.org/W2035403164",
"https://openalex.org/W2048168286",
"https://openalex.org/W2055043387",
"https://openalex.org/W2055096434",
"https://openalex.org/W2056279562",
"https://openalex.org/W2078752190",
"https://openalex.org/W2082221454",
"https://openalex.org/W2095118554",
"https://openalex.org/W2097401391",
"https://openalex.org/W209942731",
"https://openalex.org/W2106399600",
"https://openalex.org/W2110300022",
"https://openalex.org/W2126218947",
"https://openalex.org/W2133856765",
"https://openalex.org/W2143905334",
"https://openalex.org/W2149303862",
"https://openalex.org/W2154882525",
"https://openalex.org/W2157958364",
"https://openalex.org/W2162530050",
"https://openalex.org/W2169687789",
"https://openalex.org/W2170640856",
"https://openalex.org/W2288217893",
"https://openalex.org/W2302529363",
"https://openalex.org/W2323381997",
"https://openalex.org/W2397246897",
"https://openalex.org/W2401404581",
"https://openalex.org/W2460695647",
"https://openalex.org/W2536483306",
"https://openalex.org/W2547343120",
"https://openalex.org/W2602697305",
"https://openalex.org/W2735535015",
"https://openalex.org/W2767088268",
"https://openalex.org/W2804309396",
"https://openalex.org/W2888266507",
"https://openalex.org/W2895636883",
"https://openalex.org/W2903174799",
"https://openalex.org/W2914823456",
"https://openalex.org/W2916268911",
"https://openalex.org/W2928460374",
"https://openalex.org/W2952463830",
"https://openalex.org/W2953687334",
"https://openalex.org/W2973916201",
"https://openalex.org/W2986453932",
"https://openalex.org/W2996399072",
"https://openalex.org/W3029711161",
"https://openalex.org/W3030441098",
"https://openalex.org/W3082074621",
"https://openalex.org/W3082229272",
"https://openalex.org/W3108682621",
"https://openalex.org/W3128836608",
"https://openalex.org/W3133089697",
"https://openalex.org/W4211010233",
"https://openalex.org/W4388506514"
],
"referenced_works_count": 62,
"related_works": [
"https://openalex.org/W3139084279",
"https://openalex.org/W2993803458",
"https://openalex.org/W2322758488",
"https://openalex.org/W2139280806",
"https://openalex.org/W2089624338",
"https://openalex.org/W2045984543",
"https://openalex.org/W2029219055",
"https://openalex.org/W2017541916",
"https://openalex.org/W1991236112",
"https://openalex.org/W1966637560"
],
"sustainable_development_goals": [
{
"id": "https://metadata.un.org/sdg/14",
"display_name": "Life below water",
"score": 0.52
}
],
"title": "Mussel Mass Mortality and the Microbiome: Evidence for Shifts in the Bacterial Microbiome of a Declining Freshwater Bivalve",
"topics": [
{
"id": "https://openalex.org/T12097",
"display_name": "Ecological Impact of Freshwater Mussels",
"score": 0.9991,
"subfield": {
"id": "https://openalex.org/subfields/2303",
"display_name": "Ecology"
},
"field": {
"id": "https://openalex.org/fields/23",
"display_name": "Environmental Science"
},
"domain": {
"id": "https://openalex.org/domains/3",
"display_name": "Physical Sciences"
}
},
{
"id": "https://openalex.org/T12960",
"display_name": "Heterotopic Ossification and Fibrodysplasia Ossificans Progressiva",
"score": 0.9819,
"subfield": {
"id": "https://openalex.org/subfields/2745",
"display_name": "Rheumatology"
},
"field": {
"id": "https://openalex.org/fields/27",
"display_name": "Medicine"
},
"domain": {
"id": "https://openalex.org/domains/4",
"display_name": "Health Sciences"
}
},
{
"id": "https://openalex.org/T13759",
"display_name": "Pulmonary Calcification and Nodular Tumors in the Lung",
"score": 0.9804,
"subfield": {
"id": "https://openalex.org/subfields/2740",
"display_name": "Pulmonary and Respiratory Medicine"
},
"field": {
"id": "https://openalex.org/fields/27",
"display_name": "Medicine"
},
"domain": {
"id": "https://openalex.org/domains/4",
"display_name": "Health Sciences"
}
}
],
"type": "article",
"type_crossref": "journal-article",
"updated_date": "2024-08-13T06:59:29.287858",
"versions": []
}
}
