Item talk:Q252140
From geokb
{
"USGS Publications Warehouse": { "@context": "https://schema.org", "@type": "Article", "additionalType": "Journal Article", "name": "Using amplified fragment length polymorphism analysis to differentiate isolates of Pasteurella multocida serotype 1", "identifier": [ { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse IndexID", "value": "70033659", "url": "https://pubs.usgs.gov/publication/70033659" }, { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse Internal ID", "value": 70033659 }, { "@type": "PropertyValue", "propertyID": "DOI", "value": "10.7589/0090-3558-44.2.209", "url": "https://doi.org/10.7589/0090-3558-44.2.209" }, { "@type": "PropertyValue", "propertyID": "ISSN", "value": "00903558" } ], "journal": { "@type": "Periodical", "name": "Journal of Wildlife Diseases", "volumeNumber": "44", "issueNumber": "2" }, "inLanguage": "en", "isPartOf": [ { "@type": "CreativeWorkSeries", "name": "Journal of Wildlife Diseases" } ], "datePublished": "2008", "dateModified": "2022-04-06", "abstract": "Avian cholera, an infectious disease caused by the bacterium\u00a0Pasteurella multocida, kills thousands of North American wild waterfowl annually.\u00a0Pasteurella multocida\u00a0serotype 1 isolates cultured during a laboratory challenge study of Mallards (Anas platyrhynchos) and collected from wild birds and environmental samples during avian cholera outbreaks were characterized using amplified fragment length polymorphism (AFLP) analysis, a whole-genome DNA fingerprinting technique. Comparison of the AFLP profiles of 53 isolates from the laboratory challenge demonstrated that\u00a0P. multocida\u00a0underwent genetic changes during a 3-mo period. Analysis of 120\u00a0P. multocida\u00a0serotype 1 isolates collected from wild birds and environmental samples revealed that isolates were distinguishable from one another based on regional and temporal genetic characteristics. Thus, AFLP analysis had the ability to distinguish\u00a0P. multocida\u00a0isolates of the same serotype by detecting spatiotemporal genetic changes and provides a tool to advance the study of avian cholera epidemiology. Further application of AFLP technology to the examination of wild bird avian cholera outbreaks may facilitate more effective management of this disease by providing the potential to investigate correlations between virulence and\u00a0P. multocida\u00a0genotypes, to identify affiliations between bird species and bacterial genotypes, and to elucidate the role of specific bird species in disease transmission.", "description": "17 p.", "publisher": { "@type": "Organization", "name": "U.S. Geological Survey" }, "author": [ { "@type": "Person", "name": "Jefferson, K. L.", "givenName": "K. 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186, 189 ], "collected": [ 35, 91 ], "from": [ 36, 68, 92, 103 ], "birds": [ 38, 94 ], "environmental": [ 40, 96 ], "samples": [ 41, 97 ], "avian": [ 43, 142, 156 ], "cholera": [ 44, 143, 157 ], "outbreaks": [ 45, 158 ], "were": [ 46, 101 ], "characterized": [ 47 ], "using": [ 48 ], "amplified": [ 49 ], "fragment": [ 50 ], "length": [ 51 ], "polymorphism": [ 52 ], "(AFLP)": [ 53 ], "analysis,": [ 54 ], "whole-genome": [ 56 ], "DNA": [ 57 ], "fingerprinting": [ 58 ], "technique.": [ 59 ], "Comparison": [ 60 ], "AFLP": [ 63, 114, 148 ], "profiles": [ 64 ], "53": [ 66 ], "demonstrated": [ 72 ], "that": [ 73, 99 ], "P.": [ 74, 86, 121, 177 ], "underwent": [ 76 ], "genetic": [ 77, 111, 131 ], "changes": [ 78, 132 ], "3-mo": [ 81 ], "period.": [ 82 ], "Analysis": [ 83 ], "120": [ 85 ], "revealed": [ 98 ], "distinguishable": [ 102 ], "one": [ 104 ], "another": [ 105 ], "based": [ 106 ], "on": [ 107 ], "regional": [ 108 ], "temporal": [ 110 ], "characteristics.": [ 112 ], "Thus,": [ 113 ], 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Shadduck", "orcid": null }, "institutions": [ { "id": "https://openalex.org/I4210131920", "display_name": "National Wildlife Health Center", "ror": "https://ror.org/038d10y34", "country_code": "US", "type": "healthcare", "lineage": [ "https://openalex.org/I1286329397", "https://openalex.org/I1335927249", "https://openalex.org/I4210131920" ] }, { "id": "https://openalex.org/I1286329397", "display_name": "United States Geological Survey", "ror": "https://ror.org/035a68863", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1286329397", "https://openalex.org/I1335927249" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "Daniel J. Shadduck", "raw_affiliation_strings": [ "US Geological Survey, National Wildlife Health Center, 6006 Schroeder Road, Madison, Wisconsin 53711, USA" ], "affiliations": [ { "raw_affiliation_string": "US Geological Survey, National Wildlife Health Center, 6006 Schroeder Road, Madison, Wisconsin 53711, USA", "institution_ids": [ "https://openalex.org/I4210131920", "https://openalex.org/I1286329397" ] } ] } ], "best_oa_location": { "is_oa": true, "landing_page_url": "https://doi.org/10.7589/0090-3558-44.2.209", "pdf_url": "https://meridian.allenpress.com/jwd/article-pdf/44/2/209/2238295/0090-3558-44_2_209.pdf", "source": { "id": "https://openalex.org/S113896437", "display_name": "Journal of Wildlife Diseases", "issn_l": "0090-3558", "issn": [ "0090-3558", "1943-3700" ], "is_oa": false, "is_in_doaj": false, "is_core": true, "host_organization": "https://openalex.org/P4322697125", "host_organization_name": "Wildlife Disease Association", "host_organization_lineage": [ 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