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{
"USGS Publications Warehouse": { "@context": "https://schema.org", "@type": "Article", "additionalType": "Journal Article", "name": "Relationship of external fish condition to pathogen prevalence and out-migration survival in juvenile steelhead", "identifier": [ { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse IndexID", "value": "70036283", "url": "https://pubs.usgs.gov/publication/70036283" }, { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse Internal ID", "value": 70036283 }, { "@type": "PropertyValue", "propertyID": "DOI", "value": "10.1080/00028487.2011.613303", "url": "https://doi.org/10.1080/00028487.2011.613303" }, { "@type": "PropertyValue", "propertyID": "ISSN", "value": "00028487" } ], "journal": { "@type": "Periodical", "name": "Transactions of the American Fisheries Society", "volumeNumber": "140", "issueNumber": "5" }, "inLanguage": "en", "isPartOf": [ { "@type": "CreativeWorkSeries", "name": "Transactions of the American Fisheries Society" } ], "datePublished": "2011", "dateModified": "2021-01-21", "abstract": "Understanding how the external condition of juvenile salmonids is associated with internal measures of health and subsequent out\u2010migration survival can be valuable for population monitoring programs. This study investigated the use of a rapid, nonlethal, external examination to assess the condition of run\u2010of\u2010the\u2010river juvenile steelhead\u00a0Oncorhynchus mykiss\u00a0migrating from the Snake River to the Pacific Ocean. We compared the external condition (e.g., body injuries, descaling, external signs of disease, fin damage, and ectoparasite infestations) with (1) the internal condition of a steelhead as measured by the presence of selected pathogens detected by histopathology and polymerase chain reaction analysis and (2) out\u2010migration survival through the Snake and Columbia rivers as determined by passive integrated transponder (PIT) tag technology. The results from steelhead captured and euthanized (n\u00a0= 222) at Lower Monumental Dam on the lower Snake River in 2008 indicated that external condition was significantly correlated with selected measures of internal condition. The odds of testing positive for a pathogen were 39.2, 24.3, and 5.6 times greater for steelhead with severe or moderate external signs of disease or more than 20% descaling, respectively. Capture\u2013recapture models of 22,451 PIT\u2010tagged steelhead released at Lower Monumental Dam in 2007\u20132009 indicated that external condition was significantly correlated with juvenile survival. The odds of out\u2010migration survival for steelhead with moderate or severe external signs of disease, more than 20% descaling, or severe fin damage were 5.7, 4.9, 1.6, and 1.3 times lower, respectively, than those for steelhead without these external conditions. This study effectively demonstrated that specific measures of external condition were associated with both the internal condition and out\u2010migration survival of juvenile steelhead.", "description": "14 p.", "publisher": { "@type": "Organization", "name": "American Fisheries Society" }, "author": [ { "@type": "Person", "name": "Hostetter, Nathan J. nhostetter@usgs.gov", "givenName": "Nathan J.", "familyName": "Hostetter", "email": "nhostetter@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0001-6075-2157", "url": "https://orcid.org/0000-0001-6075-2157" } }, { "@type": "Person", "name": "Evans, A.F.", "givenName": "A.F.", "familyName": "Evans" }, { "@type": "Person", "name": "Roby, Daniel D. droby@usgs.gov", "givenName": "Daniel D.", "familyName": "Roby", "email": "droby@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0001-9844-0992", "url": "https://orcid.org/0000-0001-9844-0992" }, "affiliation": [ { "@type": "Organization", "name": "Coop Res Unit Seattle", "url": "https://www1.usgs.gov/coopunits/unit/Washington" } ] }, { "@type": "Person", "name": "Collis, K.", "givenName": "K.", "familyName": "Collis" }, { "@type": "Person", "name": "Hawbecker, M.", "givenName": "M.", "familyName": "Hawbecker" }, { "@type": "Person", "name": "Sandford, B.P.", "givenName": "B.P.", "familyName": "Sandford" }, { "@type": "Person", "name": "Thompson, D.E.", "givenName": "D.E.", "familyName": "Thompson" }, { "@type": "Person", "name": "Loge, F.J.", "givenName": "F.J.", "familyName": "Loge" } ], "funder": [ { "@type": "Organization", "name": "Coop Res Unit Seattle", "url": "https://www1.usgs.gov/coopunits/unit/Washington" } ], "spatialCoverage": [ { "@type": "Place", "additionalType": "country", "name": "United States", "url": "https://geonames.org/4074035" }, { "@type": "Place", "additionalType": "state", "name": "Oregon" }, { "@type": "Place", "additionalType": "state", "name": "Washington" }, { "@type": "Place", "additionalType": "unknown", "name": "Snake River basin" }, { "@type": "Place", "geo": [ { "@type": "GeoShape", "additionalProperty": { "@type": "PropertyValue", "name": "GeoJSON", "value": { "type": "FeatureCollection", "features": [ { "type": "Feature", "properties": {}, "geometry": { "type": "Polygon", "coordinates": [ [ [ -123.99169921875, 46.10370875598026 ], [ -123.15673828124999, 46.08847179577592 ], [ -122.89306640624999, 45.583289756006316 ], [ -122.45361328124999, 45.29034662473613 ], [ -120.62988281249999, 45.42929873257377 ], [ -118.71826171875, 45.72152152227954 ], [ -118.69628906249999, 46.118941506107056 ], [ -117.5537109375, 46.42271253466717 ], [ -117.20214843749999, 46.40756396630067 ], [ -117.50976562499999, 47.010225655683485 ], [ -119.11376953125, 46.70973594407157 ], [ -119.39941406249999, 46.875213396722685 ], [ -119.59716796875, 47.41322033016902 ], [ -118.65234374999999, 47.517200697839414 ], [ -117.8173828125, 47.81315451752768 ], [ 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