Item talk:Q250078
From geokb
{
"USGS Publications Warehouse": {
"@context": "https://schema.org",
"@type": "Article",
"additionalType": "Journal Article",
"name": "Why is metal bioaccumulation so variable? Biodynamics as a unifying concept",
"identifier": [
{
"@type": "PropertyValue",
"propertyID": "USGS Publications Warehouse IndexID",
"value": "70184401",
"url": "https://pubs.usgs.gov/publication/70184401"
},
{
"@type": "PropertyValue",
"propertyID": "USGS Publications Warehouse Internal ID",
"value": 70184401
},
{
"@type": "PropertyValue",
"propertyID": "DOI",
"value": "10.1021/es048947e",
"url": "https://doi.org/10.1021/es048947e"
}
],
"journal": {
"@type": "Periodical",
"name": "Environmental Science & Technology",
"volumeNumber": "39",
"issueNumber": "7"
},
"inLanguage": "en",
"isPartOf": [
{
"@type": "CreativeWorkSeries",
"name": "Environmental Science & Technology"
}
],
"datePublished": "2005",
"dateModified": "2017-08-26",
"abstract": "Ecological risks from metal contaminants are difficult to document because responses differ among species, threats differ among metals, and environmental influences are complex. Unifying concepts are needed to better tie together such complexities. Here we suggest that a biologically based conceptualization, the biodynamic model, provides the necessary unification for a key aspect in risk:\u2009 metal bioaccumulation (internal exposure). The model is mechanistically based, but empirically considers geochemical influences, biological differences, and differences among metals. Forecasts from the model agree closely with observations from nature, validating its basic assumptions. The biodynamic metal bioaccumulation model combines targeted, high-quality geochemical analyses from a site of interest with parametrization of key physiological constants for a species from that site. The physiological parameters include metal influx rates from water, influx rates from food, rate constants of loss, and growth rates (when high). We compiled results from 15 publications that forecast species-specific bioaccumulation, and compare the forecasts to bioaccumulation data from the field. These data consider concentrations that cover 7 orders of magnitude. They include 7 metals and 14 species of animals from 3 phyla and 11 marine, estuarine, and freshwater environments. The coefficient of determination (R2) between forecasts and independently observed bioaccumulation from the field was 0.98. Most forecasts agreed with observations within 2-fold. The agreement suggests that the basic assumptions of the biodynamic model are tenable. A unified explanation of metal bioaccumulation sets the stage for a realistic understanding of toxicity and ecological effects of metals in nature.",
"description": "11 p. ",
"publisher": {
"@type": "Organization",
"name": "American Chemical Society"
},
"author": [
{
"@type": "Person",
"name": "Luoma, Samuel N. snluoma@usgs.gov",
"givenName": "Samuel N.",
"familyName": "Luoma",
"email": "snluoma@usgs.gov",
"identifier": {
"@type": "PropertyValue",
"propertyID": "ORCID",
"value": "0000-0001-5443-5091",
"url": "https://orcid.org/0000-0001-5443-5091"
},
"affiliation": [
{
"@type": "Organization",
"name": "National Research Program - Western Branch",
"url": "https://www.usgs.gov/centers/arizona-water-science-center"
}
]
},
{
"@type": "Person",
"name": "Rainbow, Philip S.",
"givenName": "Philip S.",
"familyName": "Rainbow"
}
],
"funder": [
{
"@type": "Organization",
"name": "Toxic Substances Hydrology Program",
"url": null
}
]
},
"OpenAlex": {
"abstract_inverted_index": {
"Ecological": [
0
],
"risks": [
1
],
"from": [
2,
75,
82,
98,
112,
122,
126,
140,
154,
176,
197
],
"metal": [
3,
54,
90,
119,
226
],
"contaminants": [
4
],
"are": [
5,
21,
25,
220
],
"difficult": [
6
],
"to": [
7,
27,
151
],
"document": [
8
],
"because": [
9
],
"responses": [
10
],
"differ": [
11,
15
],
"among": [
12,
16,
72
],
"species,": [
13
],
"threats": [
14
],
"metals,": [
17
],
"and": [
18,
70,
132,
147,
171,
179,
183,
193,
237
],
"environmental": [
19
],
"influences": [
20
],
"complex.": [
22
],
"Unifying": [
23
],
"concepts": [
24
],
"needed": [
26
],
"better": [
28
],
"tie": [
29
],
"together": [
30
],
"such": [
31
],
"complexities.": [
32
],
"Here": [
33
],
"we": [
34
],
"suggest": [
35
],
"that": [
36,
113,
143,
161,
212
],
"a": [
37,
49,
99,
110,
232
],
"biologically": [
38
],
"based": [
39
],
"conceptualization,": [
40
],
"the": [
41,
45,
76,
149,
155,
198,
213,
217,
229
],
"biodynamic": [
42,
89,
218
],
"model,": [
43
],
"provides": [
44
],
"necessary": [
46
],
"unification": [
47
],
"for": [
48,
109,
231
],
"key": [
50,
106
],
"aspect": [
51
],
"in": [
52,
242
],
"risk:": [
53
],
"bioaccumulation": [
55,
91,
152,
196,
227
],
"(internal": [
56
],
"exposure).": [
57
],
"The": [
58,
88,
115,
186,
209
],
"model": [
59,
77,
92,
219
],
"is": [
60
],
"mechanistically": [
61
],
"based,": [
62
],
"but": [
63
],
"empirically": [
64
],
"considers": [
65
],
"geochemical": [
66,
96
],
"influences,": [
67
],
"biological": [
68
],
"differences,": [
69
],
"differences": [
71
],
"metals.": [
73
],
"Forecasts": [
74
],
"agree": [
78
],
"closely": [
79
],
"with": [
80,
103,
205
],
"observations": [
81,
206
],
"nature,": [
83
],
"validating": [
84
],
"its": [
85
],
"basic": [
86,
214
],
"assumptions.": [
87
],
"combines": [
93
],
"targeted,": [
94
],
"high-quality": [
95
],
"analyses": [
97
],
"site": [
100
],
"of": [
101,
105,
130,
165,
174,
188,
216,
225,
235,
240
],
"interest": [
102
],
"parametrization": [
104
],
"physiological": [
107,
116
],
"constants": [
108,
129
],
"species": [
111,
173
],
"site.": [
114
],
"parameters": [
117
],
"include": [
118,
168
],
"influx": [
120,
124
],
"rates": [
121,
125,
134
],
"water,": [
123
],
"food,": [
127
],
"rate": [
128
],
"loss,": [
131
],
"growth": [
133
],
"(when": [
135
],
"high).": [
136
],
"We": [
137
],
"compiled": [
138
],
"results": [
139
],
"15": [
141
],
"publications": [
142
],
"forecast": [
144
],
"species-specific": [
145
],
"bioaccumulation,": [
146
],
"compare": [
148
],
"forecasts": [
150,
192,
203
],
"data": [
153,
158
],
"field.": [
156
],
"These": [
157
],
"consider": [
159
],
"concentrations": [
160
],
"cover": [
162
],
"7": [
163,
169
],
"orders": [
164
],
"magnitude.": [
166
],
"They": [
167
],
"metals": [
170,
241
],
"14": [
172
],
"animals": [
175
],
"3": [
177
],
"phyla": [
178
],
"11": [
180
],
"marine,": [
181
],
"estuarine,": [
182
],
"freshwater": [
184
],
"environments.": [
185
],
"coefficient": [
187
],
"determination": [
189
],
"(R2)": [
190
],
"between": [
191
],
"independently": [
194
],
"observed": [
195
],
"field": [
199
],
"was": [
200
],
"0.98.": [
201
],
"Most": [
202
],
"agreed": [
204
],
"within": [
207
],
"2-fold.": [
208
],
"agreement": [
210
],
"suggests": [
211
],
"assumptions": [
215
],
"tenable.": [
221
],
"A": [
222
],
"unified": [
223
],
"explanation": [
224
],
"sets": [
228
],
"stage": [
230
],
"realistic": [
233
],
"understanding": [
234
],
"toxicity": [
236
],
"ecological": [
238
],
"effects": [
239
],
"nature.": [
243
]
},
"apc_list": null,
"apc_paid": null,
"authorships": [
{
"author_position": "first",
"author": {
"id": "https://openalex.org/A5080215349",
"display_name": "Samuel N. Luoma",
"orcid": "https://orcid.org/0000-0001-5443-5091"
},
"institutions": [
{
"id": "https://openalex.org/I1336856363",
"display_name": "Natural History Museum",
"ror": "https://ror.org/039zvsn29",
"country_code": "GB",
"type": "archive",
"lineage": [
"https://openalex.org/I1336856363"
]
},
{
"id": "https://openalex.org/I1286329397",
"display_name": "United States Geological Survey",
"ror": "https://ror.org/035a68863",
"country_code": "US",
"type": "government",
"lineage": [
"https://openalex.org/I1286329397",
"https://openalex.org/I1335927249"
]
}
],
"countries": [
"GB",
"US"
],
"is_corresponding": false,
"raw_author_name": "Samuel N. Luoma",
"raw_affiliation_strings": [
"U.S. Geological Survey, Mail Stop 465, Menlo Park, California 94025, and Department of Zoology, The Natural History Museum, Cromwell Road, London, United Kingdom SW7 5BD"
],
"affiliations": [
{
"raw_affiliation_string": "U.S. Geological Survey, Mail Stop 465, Menlo Park, California 94025, and Department of Zoology, The Natural History Museum, Cromwell Road, London, United Kingdom SW7 5BD",
"institution_ids": [
"https://openalex.org/I1336856363",
"https://openalex.org/I1286329397"
]
}
]
},
{
"author_position": "last",
"author": {
"id": "https://openalex.org/A5037457537",
"display_name": "Philip S. Rainbow",
"orcid": "https://orcid.org/0000-0001-8809-0538"
},
"institutions": [
{
"id": "https://openalex.org/I1336856363",
"display_name": "Natural History Museum",
"ror": "https://ror.org/039zvsn29",
"country_code": "GB",
"type": "archive",
"lineage": [
"https://openalex.org/I1336856363"
]
},
{
"id": "https://openalex.org/I1286329397",
"display_name": "United States Geological Survey",
"ror": "https://ror.org/035a68863",
"country_code": "US",
"type": "government",
"lineage": [
"https://openalex.org/I1286329397",
"https://openalex.org/I1335927249"
]
}
],
"countries": [
"GB",
"US"
],
"is_corresponding": false,
"raw_author_name": "Philip S. Rainbow",
"raw_affiliation_strings": [
"U.S. Geological Survey, Mail Stop 465, Menlo Park, California 94025, and Department of Zoology, The Natural History Museum, Cromwell Road, London, United Kingdom SW7 5BD"
],
"affiliations": [
{
"raw_affiliation_string": "U.S. Geological Survey, Mail Stop 465, Menlo Park, California 94025, and Department of Zoology, The Natural History Museum, Cromwell Road, London, United Kingdom SW7 5BD",
"institution_ids": [
"https://openalex.org/I1336856363",
"https://openalex.org/I1286329397"
]
}
]
}
],
"best_oa_location": null,
"biblio": {
"volume": "39",
"issue": "7",
"first_page": "1921",
"last_page": "1931"
},
"cited_by_api_url": "https://api.openalex.org/works?filter=cites:W2040734647",
"cited_by_count": 815,
"cited_by_percentile_year": {
"min": 99,
"max": 100
},
"concepts": [
{
"id": "https://openalex.org/c71572567",
"wikidata": "https://www.wikidata.org/wiki/Q864231",
"display_name": "Bioaccumulation",
"level": 2,
"score": 0.9856814,
"qid": "Q159071"
},
{
"id": "https://openalex.org/c18903297",
"wikidata": "https://www.wikidata.org/wiki/Q7150",
"display_name": "Ecology",
"level": 1,
"score": 0.522185,
"qid": "Q158972"
},
{
"id": "https://openalex.org/c39432304",
"wikidata": "https://www.wikidata.org/wiki/Q188847",
"display_name": "Environmental science",
"level": 0,
"score": 0.48408142,
"qid": "Q166085"
},
{
"id": "https://openalex.org/c13474642",
"wikidata": "https://www.wikidata.org/wiki/Q43806",
"display_name": "Invertebrate",
"level": 2,
"score": 0.46217623,
"qid": null
},
{
"id": "https://openalex.org/c107872376",
"wikidata": "https://www.wikidata.org/wiki/Q321355",
"display_name": "Environmental chemistry",
"level": 1,
"score": 0.3909131,
"qid": "Q166131"
},
{
"id": "https://openalex.org/c86803240",
"wikidata": "https://www.wikidata.org/wiki/Q420",
"display_name": "Biology",
"level": 0,
"score": 0.26180726,
"qid": "Q158998"
},
{
"id": "https://openalex.org/c185592680",
"wikidata": "https://www.wikidata.org/wiki/Q2329",
"display_name": "Chemistry",
"level": 0,
"score": 0.21704355,
"qid": "Q166089"
}
],
"corresponding_author_ids": [],
"corresponding_institution_ids": [],
"countries_distinct_count": 2,
"counts_by_year": [
{
"year": 2024,
"cited_by_count": 17
},
{
"year": 2023,
"cited_by_count": 33
},
{
"year": 2022,
"cited_by_count": 40
},
{
"year": 2021,
"cited_by_count": 42
},
{
"year": 2020,
"cited_by_count": 45
},
{
"year": 2019,
"cited_by_count": 34
},
{
"year": 2018,
"cited_by_count": 62
},
{
"year": 2017,
"cited_by_count": 42
},
{
"year": 2016,
"cited_by_count": 59
},
{
"year": 2015,
"cited_by_count": 41
},
{
"year": 2014,
"cited_by_count": 55
},
{
"year": 2013,
"cited_by_count": 41
},
{
"year": 2012,
"cited_by_count": 37
}
],
"created_date": "2016-06-24",
"datasets": [],
"display_name": "Why Is Metal Bioaccumulation So Variable? Biodynamics as a Unifying Concept",
"doi": "https://doi.org/10.1021/es048947e",
"fulltext_origin": "ngrams",
"fwci": 6.302,
"grants": [],
"has_fulltext": true,
"id": "https://openalex.org/W2040734647",
"ids": {
"openalex": "https://openalex.org/W2040734647",
"doi": "https://doi.org/10.1021/es048947e",
"mag": "2040734647",
"pmid": "https://pubmed.ncbi.nlm.nih.gov/15871220"
},
"indexed_in": [
"crossref",
"pubmed"
],
"institutions_distinct_count": 2,
"is_paratext": false,
"is_retracted": false,
"keywords": [
{
"id": "https://openalex.org/keywords/bioaccumulation",
"display_name": "Bioaccumulation",
"score": 0.530133
},
{
"id": "https://openalex.org/keywords/metal-toxicity",
"display_name": "Metal Toxicity",
"score": 0.51654
}
],
"language": "en",
"locations": [
{
"is_oa": false,
"landing_page_url": "https://doi.org/10.1021/es048947e",
"pdf_url": null,
"source": {
"id": "https://openalex.org/S13479253",
"display_name": "Environmental Science & Technology",
"issn_l": "0013-936X",
"issn": [
"0013-936X",
"1520-5851"
],
"is_oa": false,
"is_in_doaj": false,
"is_core": true,
"host_organization": "https://openalex.org/P4310320006",
"host_organization_name": "American Chemical Society",
"host_organization_lineage": [
"https://openalex.org/P4310320006"
],
"host_organization_lineage_names": [
"American Chemical Society"
],
"type": "journal"
},
"license": null,
"license_id": null,
"version": null,
"is_accepted": false,
"is_published": false
},
{
"is_oa": false,
"landing_page_url": "https://pubmed.ncbi.nlm.nih.gov/15871220",
"pdf_url": null,
"source": {
"id": "https://openalex.org/S4306525036",
"display_name": "PubMed",
"issn_l": null,
"issn": null,
"is_oa": false,
"is_in_doaj": false,
"is_core": false,
"host_organization": "https://openalex.org/I1299303238",
"host_organization_name": "National Institutes of Health",
"host_organization_lineage": [
"https://openalex.org/I1299303238"
],
"host_organization_lineage_names": [
"National Institutes of Health"
],
"type": "repository"
},
"license": null,
"license_id": null,
"version": null,
"is_accepted": false,
"is_published": false
}
],
"locations_count": 2,
"mesh": [
{
"descriptor_ui": "D017753",
"descriptor_name": "Ecosystem",
"qualifier_ui": "",
"qualifier_name": null,
"is_major_topic": true
},
{
"descriptor_ui": "D004784",
"descriptor_name": "Environmental Monitoring",
"qualifier_ui": "Q000379",
"qualifier_name": "methods",
"is_major_topic": true
},
{
"descriptor_ui": "D004785",
"descriptor_name": "Environmental Pollutants",
"qualifier_ui": "Q000493",
"qualifier_name": "pharmacokinetics",
"is_major_topic": true
},
{
"descriptor_ui": "D007448",
"descriptor_name": "Invertebrates",
"qualifier_ui": "Q000378",
"qualifier_name": "metabolism",
"is_major_topic": true
},
{
"descriptor_ui": "D019216",
"descriptor_name": "Metals, Heavy",
"qualifier_ui": "Q000493",
"qualifier_name": "pharmacokinetics",
"is_major_topic": true
},
{
"descriptor_ui": "D008954",
"descriptor_name": "Models, Biological",
"qualifier_ui": "",
"qualifier_name": null,
"is_major_topic": true
},
{
"descriptor_ui": "D000818",
"descriptor_name": "Animals",
"qualifier_ui": "",
"qualifier_name": null,
"is_major_topic": false
},
{
"descriptor_ui": "D001682",
"descriptor_name": "Biological Availability",
"qualifier_ui": "",
"qualifier_name": null,
"is_major_topic": false
},
{
"descriptor_ui": "D004784",
"descriptor_name": "Environmental Monitoring",
"qualifier_ui": "",
"qualifier_name": null,
"is_major_topic": false
},
{
"descriptor_ui": "D004785",
"descriptor_name": "Environmental Pollutants",
"qualifier_ui": "",
"qualifier_name": null,
"is_major_topic": false
},
{
"descriptor_ui": "D007448",
"descriptor_name": "Invertebrates",
"qualifier_ui": "",
"qualifier_name": null,
"is_major_topic": false
},
{
"descriptor_ui": "D019216",
"descriptor_name": "Metals, Heavy",
"qualifier_ui": "",
"qualifier_name": null,
"is_major_topic": false
},
{
"descriptor_ui": "D013045",
"descriptor_name": "Species Specificity",
"qualifier_ui": "",
"qualifier_name": null,
"is_major_topic": false
}
],
"ngrams_url": "https://api.openalex.org/works/W2040734647/ngrams",
"open_access": {
"is_oa": false,
"oa_status": "closed",
"oa_url": null,
"any_repository_has_fulltext": false
},
"primary_location": {
"is_oa": false,
"landing_page_url": "https://doi.org/10.1021/es048947e",
"pdf_url": null,
"source": {
"id": "https://openalex.org/S13479253",
"display_name": "Environmental Science & Technology",
"issn_l": "0013-936X",
"issn": [
"0013-936X",
"1520-5851"
],
"is_oa": false,
"is_in_doaj": false,
"is_core": true,
"host_organization": "https://openalex.org/P4310320006",
"host_organization_name": "American Chemical Society",
"host_organization_lineage": [
"https://openalex.org/P4310320006"
],
"host_organization_lineage_names": [
"American Chemical Society"
],
"type": "journal"
},
"license": null,
"license_id": null,
"version": null,
"is_accepted": false,
"is_published": false
},
"primary_topic": {
"id": "https://openalex.org/T10139",
"display_name": "Environmental Impact of Heavy Metal Contamination",
"score": 0.9996,
"subfield": {
"id": "https://openalex.org/subfields/2310",
"display_name": "Pollution"
},
"field": {
"id": "https://openalex.org/fields/23",
"display_name": "Environmental Science"
},
"domain": {
"id": "https://openalex.org/domains/3",
"display_name": "Physical Sciences"
}
},
"publication_date": "2005-02-25",
"publication_year": 2005,
"referenced_works": [
"https://openalex.org/W1969193693",
"https://openalex.org/W1971803084",
"https://openalex.org/W1976416147",
"https://openalex.org/W1983157882",
"https://openalex.org/W1983862485",
"https://openalex.org/W1991184272",
"https://openalex.org/W1991781416",
"https://openalex.org/W1992655702",
"https://openalex.org/W1994985042",
"https://openalex.org/W1997541011",
"https://openalex.org/W1998843413",
"https://openalex.org/W2007048068",
"https://openalex.org/W2007634424",
"https://openalex.org/W2009031556",
"https://openalex.org/W2028394533",
"https://openalex.org/W2033478774",
"https://openalex.org/W2036214554",
"https://openalex.org/W2038001610",
"https://openalex.org/W2038040470",
"https://openalex.org/W2041380591",
"https://openalex.org/W2042488944",
"https://openalex.org/W2044769923",
"https://openalex.org/W2050944426",
"https://openalex.org/W2057676428",
"https://openalex.org/W2063459352",
"https://openalex.org/W2070533266",
"https://openalex.org/W2071793255",
"https://openalex.org/W2071807643",
"https://openalex.org/W2079664938",
"https://openalex.org/W2082958361",
"https://openalex.org/W2094297341",
"https://openalex.org/W2095460330",
"https://openalex.org/W2095508360",
"https://openalex.org/W2111212220",
"https://openalex.org/W2113860919",
"https://openalex.org/W2125404399",
"https://openalex.org/W2134199516",
"https://openalex.org/W2159974851",
"https://openalex.org/W2170797455",
"https://openalex.org/W2269332496",
"https://openalex.org/W2335215586",
"https://openalex.org/W2514141654",
"https://openalex.org/W251687509",
"https://openalex.org/W2992546864",
"https://openalex.org/W4246808704",
"https://openalex.org/W4247632535",
"https://openalex.org/W45878615",
"https://openalex.org/W586358893",
"https://openalex.org/W658269509"
],
"referenced_works_count": 49,
"related_works": [
"https://openalex.org/W4246950285",
"https://openalex.org/W3024730795",
"https://openalex.org/W2766670202",
"https://openalex.org/W2484374451",
"https://openalex.org/W2386220892",
"https://openalex.org/W2063690946",
"https://openalex.org/W2063469566",
"https://openalex.org/W2034132533",
"https://openalex.org/W2028051655",
"https://openalex.org/W2015633080"
],
"sustainable_development_goals": [
{
"id": "https://metadata.un.org/sdg/14",
"score": 0.87,
"display_name": "Life below water"
}
],
"title": "Why Is Metal Bioaccumulation So Variable? Biodynamics as a Unifying Concept",
"topics": [
{
"id": "https://openalex.org/T10139",
"display_name": "Environmental Impact of Heavy Metal Contamination",
"score": 0.9996,
"subfield": {
"id": "https://openalex.org/subfields/2310",
"display_name": "Pollution"
},
"field": {
"id": "https://openalex.org/fields/23",
"display_name": "Environmental Science"
},
"domain": {
"id": "https://openalex.org/domains/3",
"display_name": "Physical Sciences"
}
},
{
"id": "https://openalex.org/T10447",
"display_name": "Aquatic Ecotoxicology and Biomarkers of Pollution",
"score": 0.9994,
"subfield": {
"id": "https://openalex.org/subfields/2307",
"display_name": "Health, Toxicology and Mutagenesis"
},
"field": {
"id": "https://openalex.org/fields/23",
"display_name": "Environmental Science"
},
"domain": {
"id": "https://openalex.org/domains/3",
"display_name": "Physical Sciences"
}
},
{
"id": "https://openalex.org/T11634",
"display_name": "Assessment of Surface Water Quality",
"score": 0.9884,
"subfield": {
"id": "https://openalex.org/subfields/2312",
"display_name": "Water Science and Technology"
},
"field": {
"id": "https://openalex.org/fields/23",
"display_name": "Environmental Science"
},
"domain": {
"id": "https://openalex.org/domains/3",
"display_name": "Physical Sciences"
}
}
],
"type": "review",
"type_crossref": "journal-article",
"updated_date": "2024-08-06T07:47:59.503216",
"versions": [],
"qid": null
}
}
