Item talk:Q242594
From geokb
{
"USGS Publications Warehouse": { "@context": "https://schema.org", "@type": "Article", "additionalType": "Journal Article", "name": "Adjusting survival estimates for premature transmitter failure: A case study from the Sacramento-San Joaquin Delta", "identifier": [ { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse IndexID", "value": "70043969", "url": "https://pubs.usgs.gov/publication/70043969" }, { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse Internal ID", "value": 70043969 }, { "@type": "PropertyValue", "propertyID": "DOI", "value": "10.1007/s10641-012-0016-3", "url": "https://doi.org/10.1007/s10641-012-0016-3" } ], "journal": { "@type": "Periodical", "name": "Environmental Biology of Fishes", "volumeNumber": "96", "issueNumber": "2" }, "inLanguage": "en", "isPartOf": [ { "@type": "CreativeWorkSeries", "name": "Environmental Biology of Fishes" } ], "datePublished": "2013", "dateModified": "2016-05-04", "abstract": "In telemetry studies, premature tag failure causes negative bias in fish survival estimates because tag failure is interpreted as fish mortality. We used mark-recapture modeling to adjust estimates of fish survival for a previous study where premature tag failure was documented. High rates of tag failure occurred during the Vernalis Adaptive Management Plan\u2019s (VAMP) 2008 study to estimate survival of fall-run Chinook salmon (Oncorhynchus tshawytscha) during migration through the San Joaquin River and Sacramento-San Joaquin Delta, California. Due to a high rate of tag failure, the observed travel time distribution was likely negatively biased, resulting in an underestimate of tag survival probability in this study. Consequently, the bias-adjustment method resulted in only a small increase in estimated fish survival when the observed travel time distribution was used to estimate the probability of tag survival. Since the bias-adjustment failed to remove bias, we used historical travel time data and conducted a sensitivity analysis to examine how fish survival might have varied across a range of tag survival probabilities. Our analysis suggested that fish survival estimates were low (95% confidence bounds range from 0.052 to 0.227) over a wide range of plausible tag survival probabilities (0.48\u20131.00), and this finding is consistent with other studies in this system. When tags fail at a high rate, available methods to adjust for the bias may perform poorly. Our example highlights the importance of evaluating the tag life assumption during survival studies, and presents a simple framework for evaluating adjusted survival estimates when auxiliary travel time data are available.", "description": "9 p.", "publisher": { "@type": "Organization", "name": "Kluwer Academic Publishers" }, "author": [ { "@type": "Person", "name": "Perry, Russell W. rperry@usgs.gov", "givenName": "Russell W.", "familyName": "Perry", "email": "rperry@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0003-4110-8619", "url": "https://orcid.org/0000-0003-4110-8619" }, "affiliation": [ { "@type": "Organization", "name": "Western Fisheries Research Center", "url": "https://www.usgs.gov/centers/western-fisheries-research-center" } ] }, { "@type": "Person", "name": "Adams, Noah S. nadams@usgs.gov", "givenName": "Noah S.", "familyName": "Adams", "email": "nadams@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0002-8354-0293", "url": "https://orcid.org/0000-0002-8354-0293" }, "affiliation": [ { "@type": "Organization", "name": "Western Fisheries Research Center", "url": "https://www.usgs.gov/centers/western-fisheries-research-center" } ] }, { "@type": "Person", "name": "Holbrook, Christopher M. cholbrook@usgs.gov", "givenName": "Christopher M.", "familyName": "Holbrook", "email": "cholbrook@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0001-8203-6856", "url": "https://orcid.org/0000-0001-8203-6856" }, "affiliation": [ { "@type": "Organization", "name": "Great Lakes Science Center", "url": "https://www.usgs.gov/centers/great-lakes-science-center" } ] }, { "@type": "Person", "name": "Brandes, Patricia L.", "givenName": "Patricia L.", "familyName": "Brandes" } ], "funder": [ { "@type": "Organization", "name": "Western Fisheries Research Center", "url": "https://www.usgs.gov/centers/western-fisheries-research-center" } ], "spatialCoverage": [ { "@type": "Place", "additionalType": "country", "name": "United States", "url": "https://geonames.org/4074035" }, { "@type": "Place", "additionalType": "state", "name": "California" }, { "@type": "Place", "additionalType": "unknown", "name": "Sacramento-San Joaquin Delta", "url": "https://geonames.org/5389649" }, { "@type": "Place", "additionalType": "unknown", "name": "San Joaquin River", "url": "https://geonames.org/5392159" }, { "@type": "Place", "geo": [ { "@type": "GeoShape", "additionalProperty": { "@type": "PropertyValue", "name": "GeoJSON", "value": { "type": "FeatureCollection", "features": [ { "type": "Feature", "properties": {}, "geometry": { "type": "Polygon", "coordinates": [ [ [ -121.929093, 37.735197 ], [ -121.929093, 38.126074 ], [ -121.300766, 38.126074 ], [ -121.300766, 37.735197 ], [ -121.929093, 37.735197 ] ] ] } } ] } } }, { "@type": "GeoCoordinates", "latitude": 37.9306355, "longitude": -121.6149295 } ] } ] }, "OpenAlex": { "abstract_inverted_index": null, "apc_list": { "value": 2690, "currency": "EUR", "value_usd": 3390, "provenance": "doaj" }, "apc_paid": null, "authorships": [ { "author_position": "first", "author": { "id": "https://openalex.org/A5013174057", "display_name": "Christopher M. 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