Item talk:Q239774

From geokb

{

 "USGS Publications Warehouse": {
   "@context": "https://schema.org",
   "@type": "Article",
   "additionalType": "Journal Article",
   "name": "Surveillance for highly pathogenic influenza A viruses in California during 2014\u20132015 provides insights into viral evolutionary pathways and the spatiotemporal extent of viruses in the Pacific Americas Flyway",
   "identifier": [
     {
       "@type": "PropertyValue",
       "propertyID": "USGS Publications Warehouse IndexID",
       "value": "70192823",
       "url": "https://pubs.usgs.gov/publication/70192823"
     },
     {
       "@type": "PropertyValue",
       "propertyID": "USGS Publications Warehouse Internal ID",
       "value": 70192823
     },
     {
       "@type": "PropertyValue",
       "propertyID": "DOI",
       "value": "10.1038/emi.2017.66",
       "url": "https://doi.org/10.1038/emi.2017.66"
     }
   ],
   "journal": {
     "@type": "Periodical",
     "name": "Emerging Microbes & Infections",
     "volumeNumber": "6",
     "issueNumber": null
   },
   "inLanguage": "en",
   "isPartOf": [
     {
       "@type": "CreativeWorkSeries",
       "name": "Emerging Microbes & Infections"
     }
   ],
   "datePublished": "2017",
   "dateModified": "2017-11-10",
   "abstract": "We used surveillance data collected in California before, concurrent with, and subsequent to an outbreak of highly pathogenic (HP) clade 2.3.4.4 influenza A viruses (IAVs) in 2014\u20132015 to (i) evaluate IAV prevalence in waterfowl, (ii) assess the evidence for spill-over infections in marine mammals and (iii) genetically characterize low-pathogenic (LP) and HP IAVs to refine inference on the spatiotemporal extent of HP genome constellations and to evaluate possible evolutionary pathways. We screened samples from 1496 waterfowl and 1142 marine mammals collected from April 2014 to August 2015 and detected IAV RNA in 159 samples collected from birds (n=157) and pinnipeds (n=2). HP IAV RNA was identified in three samples originating from American wigeon (Anas americana). Genetic sequence data were generated for a clade 2.3.4.4 HP IAV-positive diagnostic sample and 57 LP IAV isolates. Phylogenetic analyses revealed that the HP IAV was a reassortant H5N8 virus with gene segments closely related to LP IAVs detected in mallards (Anas platyrhynchos) sampled in California and other IAVs detected in wild birds sampled within the Pacific Americas Flyway. In addition, our analysis provided support for common ancestry between LP IAVs recovered from waterfowl sampled in California and gene segments of reassortant HP H5N1 IAVs detected in British Columbia, Canada and Washington, USA. Our investigation provides evidence that waterfowl are likely to have played a role in the evolution of reassortant HP IAVs in the Pacific Americas Flyway during 2014\u20132015, whereas we did not find support for spill-over infections in potential pinniped hosts.",
   "description": "e80; 10 p.",
   "publisher": {
     "@type": "Organization",
     "name": "Nature"
   },
   "author": [
     {
       "@type": "Person",
       "name": "Ramey, Andrew M. aramey@usgs.gov",
       "givenName": "Andrew M.",
       "familyName": "Ramey",
       "email": "aramey@usgs.gov",
       "identifier": {
         "@type": "PropertyValue",
         "propertyID": "ORCID",
         "value": "0000-0002-3601-8400",
         "url": "https://orcid.org/0000-0002-3601-8400"
       },
       "affiliation": [
         {
           "@type": "Organization",
           "name": "Alaska Science Center",
           "url": "https://www.usgs.gov/centers/alaska-science-center"
         },
         {
           "@type": "Organization",
           "name": "Alaska Science Center Biology WTEB",
           "url": "https://www.usgs.gov/centers/alaska-science-center"
         }
       ]
     },
     {
       "@type": "Person",
       "name": "Hill, Nichola J.",
       "givenName": "Nichola J.",
       "familyName": "Hill"
     },
     {
       "@type": "Person",
       "name": "Cline, Troy",
       "givenName": "Troy",
       "familyName": "Cline"
     },
     {
       "@type": "Person",
       "name": "Plancarte, Magdalena",
       "givenName": "Magdalena",
       "familyName": "Plancarte"
     },
     {
       "@type": "Person",
       "name": "De La Cruz, Susan sdelacruz@usgs.gov",
       "givenName": "Susan",
       "familyName": "De La Cruz",
       "email": "sdelacruz@usgs.gov",
       "affiliation": [
         {
           "@type": "Organization",
           "name": "Western Ecological Research Center",
           "url": "https://www.usgs.gov/centers/werc"
         }
       ]
     },
     {
       "@type": "Person",
       "name": "Casazza, Michael L. mike_casazza@usgs.gov",
       "givenName": "Michael L.",
       "familyName": "Casazza",
       "email": "mike_casazza@usgs.gov",
       "identifier": {
         "@type": "PropertyValue",
         "propertyID": "ORCID",
         "value": "0000-0002-5636-735X",
         "url": "https://orcid.org/0000-0002-5636-735X"
       },
       "affiliation": [
         {
           "@type": "Organization",
           "name": "Western Ecological Research Center",
           "url": "https://www.usgs.gov/centers/werc"
         }
       ]
     },
     {
       "@type": "Person",
       "name": "Ackerman, Joshua T. jackerman@usgs.gov",
       "givenName": "Joshua T.",
       "familyName": "Ackerman",
       "email": "jackerman@usgs.gov",
       "identifier": {
         "@type": "PropertyValue",
         "propertyID": "ORCID",
         "value": "0000-0002-3074-8322",
         "url": "https://orcid.org/0000-0002-3074-8322"
       },
       "affiliation": [
         {
           "@type": "Organization",
           "name": "Western Ecological Research Center",
           "url": "https://www.usgs.gov/centers/werc"
         }
       ]
     },
     {
       "@type": "Person",
       "name": "Fleskes, Joseph P. joe_fleskes@usgs.gov",
       "givenName": "Joseph P.",
       "familyName": "Fleskes",
       "email": "joe_fleskes@usgs.gov",
       "identifier": {
         "@type": "PropertyValue",
         "propertyID": "ORCID",
         "value": "0000-0001-5388-6675",
         "url": "https://orcid.org/0000-0001-5388-6675"
       },
       "affiliation": [
         {
           "@type": "Organization",
           "name": "Western Ecological Research Center",
           "url": "https://www.usgs.gov/centers/werc"
         }
       ]
     },
     {
       "@type": "Person",
       "name": "Vickers, T. Winston",
       "givenName": "T. Winston",
       "familyName": "Vickers"
     },
     {
       "@type": "Person",
       "name": "Reeves, Andrew B. areeves@usgs.gov",
       "givenName": "Andrew B.",
       "familyName": "Reeves",
       "email": "areeves@usgs.gov",
       "identifier": {
         "@type": "PropertyValue",
         "propertyID": "ORCID",
         "value": "0000-0002-7526-0726",
         "url": "https://orcid.org/0000-0002-7526-0726"
       },
       "affiliation": [
         {
           "@type": "Organization",
           "name": "Alaska Science Center",
           "url": "https://www.usgs.gov/centers/alaska-science-center"
         },
         {
           "@type": "Organization",
           "name": "Alaska Science Center Biology WTEB",
           "url": "https://www.usgs.gov/centers/alaska-science-center"
         }
       ]
     },
     {
       "@type": "Person",
       "name": "Gulland, Frances",
       "givenName": "Frances",
       "familyName": "Gulland"
     },
     {
       "@type": "Person",
       "name": "Fontaine, Christine",
       "givenName": "Christine",
       "familyName": "Fontaine"
     },
     {
       "@type": "Person",
       "name": "Prosser, Diann J. dprosser@usgs.gov",
       "givenName": "Diann J.",
       "familyName": "Prosser",
       "email": "dprosser@usgs.gov",
       "identifier": {
         "@type": "PropertyValue",
         "propertyID": "ORCID",
         "value": "0000-0002-5251-1799",
         "url": "https://orcid.org/0000-0002-5251-1799"
       },
       "affiliation": [
         {
           "@type": "Organization",
           "name": "Patuxent Wildlife Research Center",
           "url": "https://www.usgs.gov/centers/pwrc"
         }
       ]
     },
     {
       "@type": "Person",
       "name": "Runstadler, Jonathan",
       "givenName": "Jonathan",
       "familyName": "Runstadler"
     },
     {
       "@type": "Person",
       "name": "Boyce, Walter M.",
       "givenName": "Walter M.",
       "familyName": "Boyce"
     }
   ],
   "funder": [
     {
       "@type": "Organization",
       "name": "Alaska Science Center Biology WTEB",
       "url": "https://www.usgs.gov/centers/alaska-science-center"
     }
   ]
 },
 "OpenAlex": {
   "abstract_inverted_index": {
     "We": [
       0,
       70
     ],
     "used": [
       1
     ],
     "surveillance": [
       2
     ],
     "data": [
       3,
       117
     ],
     "collected": [
       4,
       80,
       94
     ],
     "in": [
       5,
       25,
       32,
       41,
       91,
       106,
       154,
       159,
       165,
       190,
       201,
       221,
       228,
       244
     ],
     "California": [
       6,
       160,
       191
     ],
     "before,": [
       7
     ],
     "concurrent": [
       8
     ],
     "with,": [
       9
     ],
     "and": [
       10,
       44,
       50,
       64,
       76,
       87,
       98,
       128,
       161,
       192,
       205
     ],
     "subsequent": [
       11
     ],
     "to": [
       12,
       27,
       53,
       65,
       84,
       150,
       216
     ],
     "an": [
       13
     ],
     "outbreak": [
       14
     ],
     "of": [
       15,
       60,
       195,
       224
     ],
     "highly": [
       16
     ],
     "pathogenic": [
       17
     ],
     "(HP)": [
       18
     ],
     "clade": [
       19,
       122
     ],
     "2.3.4.4": [
       20,
       123
     ],
     "influenza": [
       21
     ],
     "A": [
       22
     ],
     "viruses": [
       23
     ],
     "(IAVs)": [
       24
     ],
     "2014-2015": [
       26
     ],
     "(i)": [
       28
     ],
     "evaluate": [
       29,
       66
     ],
     "IAV": [
       30,
       89,
       102,
       131,
       139
     ],
     "prevalence": [
       31
     ],
     "waterfowl,": [
       33
     ],
     "(ii)": [
       34
     ],
     "assess": [
       35
     ],
     "the": [
       36,
       57,
       137,
       170,
       222,
       229
     ],
     "evidence": [
       37,
       211
     ],
     "for": [
       38,
       120,
       180,
       241
     ],
     "spill-over": [
       39,
       242
     ],
     "infections": [
       40,
       243
     ],
     "marine": [
       42,
       78
     ],
     "mammals": [
       43,
       79
     ],
     "(iii)": [
       45
     ],
     "genetically": [
       46
     ],
     "characterize": [
       47
     ],
     "low-pathogenic": [
       48
     ],
     "(LP)": [
       49
     ],
     "HP": [
       51,
       61,
       101,
       124,
       138,
       197,
       226
     ],
     "IAVs": [
       52,
       152,
       163,
       185,
       199,
       227
     ],
     "refine": [
       54
     ],
     "inference": [
       55
     ],
     "on": [
       56
     ],
     "spatiotemporal": [
       58
     ],
     "extent": [
       59
     ],
     "genome": [
       62
     ],
     "constellations": [
       63
     ],
     "possible": [
       67
     ],
     "evolutionary": [
       68
     ],
     "pathways.": [
       69
     ],
     "screened": [
       71
     ],
     "samples": [
       72,
       93,
       108
     ],
     "from": [
       73,
       81,
       95,
       110,
       187
     ],
     "1496": [
       74
     ],
     "waterfowl": [
       75,
       188,
       213
     ],
     "1142": [
       77
     ],
     "April": [
       82
     ],
     "2014": [
       83
     ],
     "August": [
       85
     ],
     "2015": [
       86
     ],
     "detected": [
       88,
       153,
       164,
       200
     ],
     "RNA": [
       90,
       103
     ],
     "159": [
       92
     ],
     "birds": [
       96,
       167
     ],
     "(n=157)": [
       97
     ],
     "pinnipeds": [
       99
     ],
     "(n=2).": [
       100
     ],
     "was": [
       104,
       140
     ],
     "identified": [
       105
     ],
     "three": [
       107
     ],
     "originating": [
       109
     ],
     "American": [
       111
     ],
     "wigeon": [
       112
     ],
     "(Anas": [
       113,
       156
     ],
     "americana).": [
       114
     ],
     "Genetic": [
       115
     ],
     "sequence": [
       116
     ],
     "were": [
       118
     ],
     "generated": [
       119
     ],
     "a": [
       121,
       141,
       219
     ],
     "IAV-positive": [
       125
     ],
     "diagnostic": [
       126
     ],
     "sample": [
       127
     ],
     "57": [
       129
     ],
     "LP": [
       130,
       151,
       184
     ],
     "isolates.": [
       132
     ],
     "Phylogenetic": [
       133
     ],
     "analyses": [
       134
     ],
     "revealed": [
       135
     ],
     "that": [
       136,
       212
     ],
     "reassortant": [
       142,
       196,
       225
     ],
     "H5N8": [
       143
     ],
     "virus": [
       144
     ],
     "with": [
       145
     ],
     "gene": [
       146,
       193
     ],
     "segments": [
       147,
       194
     ],
     "closely": [
       148
     ],
     "related": [
       149
     ],
     "mallards": [
       155
     ],
     "platyrhynchos)": [
       157
     ],
     "sampled": [
       158,
       168,
       189
     ],
     "other": [
       162
     ],
     "wild": [
       166
     ],
     "within": [
       169
     ],
     "Pacific": [
       171,
       230
     ],
     "Americas": [
       172,
       231
     ],
     "Flyway.": [
       173
     ],
     "In": [
       174
     ],
     "addition,": [
       175
     ],
     "our": [
       176
     ],
     "analysis": [
       177
     ],
     "provided": [
       178
     ],
     "support": [
       179,
       240
     ],
     "common": [
       181
     ],
     "ancestry": [
       182
     ],
     "between": [
       183
     ],
     "recovered": [
       186
     ],
     "H5N1": [
       198
     ],
     "British": [
       202
     ],
     "Columbia,": [
       203
     ],
     "Canada": [
       204
     ],
     "Washington,": [
       206
     ],
     "USA.": [
       207
     ],
     "Our": [
       208
     ],
     "investigation": [
       209
     ],
     "provides": [
       210
     ],
     "are": [
       214
     ],
     "likely": [
       215
     ],
     "have": [
       217
     ],
     "played": [
       218
     ],
     "role": [
       220
     ],
     "evolution": [
       223
     ],
     "Flyway": [
       232
     ],
     "during": [
       233
     ],
     "2014-2015,": [
       234
     ],
     "whereas": [
       235
     ],
     "we": [
       236
     ],
     "did": [
       237
     ],
     "not": [
       238
     ],
     "find": [
       239
     ],
     "potential": [
       245
     ],
     "pinniped": [
       246
     ],
     "hosts.": [
       247
     ]
   },
   "apc_list": {
     "value": 2155,
     "currency": "GBP",
     "value_usd": 2643,
     "provenance": "doaj"
   },
   "apc_paid": {
     "value": 2155,
     "currency": "GBP",
     "value_usd": 2643,
     "provenance": "doaj"
   },
   "authorships": [
     {
       "author_position": "first",
       "author": {
         "id": "https://openalex.org/A5020992395",
         "display_name": "Andrew M. Ramey",
         "orcid": "https://orcid.org/0000-0002-3601-8400"
       },
       "institutions": [
         {
           "id": "https://openalex.org/I1286329397",
           "display_name": "United States Geological Survey",
           "ror": "https://ror.org/035a68863",
           "country_code": "US",
           "type": "government",
           "lineage": [
             "https://openalex.org/I1286329397",
             "https://openalex.org/I1335927249"
           ]
         }
       ],
       "countries": [
         "US"
       ],
       "is_corresponding": true,
       "raw_author_name": "Andrew M Ramey",
       "raw_affiliation_strings": [
         "US Geological Survey, Alaska Science Center, 4210 University Drive, Anchorage, AK 99508, USA"
       ],
       "affiliations": [
         {
           "raw_affiliation_string": "US Geological Survey, Alaska Science Center, 4210 University Drive, Anchorage, AK 99508, USA",
           "institution_ids": [
             "https://openalex.org/I1286329397"
           ]
         }
       ]
     },
     {
       "author_position": "middle",
       "author": {
         "id": "https://openalex.org/A5082127913",
         "display_name": "Nichola J. Hill",
         "orcid": "https://orcid.org/0000-0003-3213-6693"
       },
       "institutions": [
         {
           "id": "https://openalex.org/I63966007",
           "display_name": "Massachusetts Institute of Technology",
           "ror": "https://ror.org/042nb2s44",
           "country_code": "US",
           "type": "education",
           "lineage": [
             "https://openalex.org/I63966007"
           ]
         }
       ],
       "countries": [
         "US"
       ],
       "is_corresponding": false,
       "raw_author_name": "Nichola J Hill",
       "raw_affiliation_strings": [
         "Massachusetts Institute of Technology, Cambridge, MA 02139, USA"
       ],
       "affiliations": [
         {
           "raw_affiliation_string": "Massachusetts Institute of Technology, Cambridge, MA 02139, USA",
           "institution_ids": [
             "https://openalex.org/I63966007"
           ]
         }
       ]
     },
     {
       "author_position": "middle",
       "author": {
         "id": "https://openalex.org/A5081004838",
         "display_name": "Troy Cline",
         "orcid": null
       },
       "institutions": [
         {
           "id": "https://openalex.org/I36053171",
           "display_name": "California State University, Chico",
           "ror": "https://ror.org/027bzz146",
           "country_code": "US",
           "type": "education",
           "lineage": [
             "https://openalex.org/I36053171"
           ]
         }
       ],
       "countries": [
         "US"
       ],
       "is_corresponding": false,
       "raw_author_name": "Troy Cline",
       "raw_affiliation_strings": [
         "Department of Biological SciencesCalifornia State University, Chico, CA 95929, USA"
       ],
       "affiliations": [
         {
           "raw_affiliation_string": "Department of Biological SciencesCalifornia State University, Chico, CA 95929, USA",
           "institution_ids": [
             "https://openalex.org/I36053171"
           ]
         }
       ]
     },
     {
       "author_position": "middle",
       "author": {
         "id": "https://openalex.org/A5008065130",
         "display_name": "Magdalena Plancarte",
         "orcid": null
       },
       "institutions": [
         {
           "id": "https://openalex.org/I84218800",
           "display_name": "University of California, Davis",
           "ror": "https://ror.org/05rrcem69",
           "country_code": "US",
           "type": "education",
           "lineage": [
             "https://openalex.org/I84218800"
           ]
         }
       ],
       "countries": [
         "US"
       ],
       "is_corresponding": false,
       "raw_author_name": "Magdalena Plancarte",
       "raw_affiliation_strings": [
         "School of Veterinary Medicine, Wildlife Health CenterUniversity of California Davis, One Shields Avenue, Davis, CA 95616, USA"
       ],
       "affiliations": [
         {
           "raw_affiliation_string": "School of Veterinary Medicine, Wildlife Health CenterUniversity of California Davis, One Shields Avenue, Davis, CA 95616, USA",
           "institution_ids": [
             "https://openalex.org/I84218800"
           ]
         }
       ]
     },
     {
       "author_position": "middle",
       "author": {
         "id": "https://openalex.org/A5083869620",
         "display_name": "Susan De La Cruz",
         "orcid": null
       },
       "institutions": [
         {
           "id": "https://openalex.org/I1286329397",
           "display_name": "United States Geological Survey",
           "ror": "https://ror.org/035a68863",
           "country_code": "US",
           "type": "government",
           "lineage": [
             "https://openalex.org/I1286329397",
             "https://openalex.org/I1335927249"
           ]
         }
       ],
       "countries": [
         "US"
       ],
       "is_corresponding": false,
       "raw_author_name": "Susan De La Cruz",
       "raw_affiliation_strings": [
         "US Geological Survey, Western Ecological Research Center, San Francisco Bay Estuary Field Station, 505 Azuar Drive, Vallejo, CA 94592, USA"
       ],
       "affiliations": [
         {
           "raw_affiliation_string": "US Geological Survey, Western Ecological Research Center, San Francisco Bay Estuary Field Station, 505 Azuar Drive, Vallejo, CA 94592, USA",
           "institution_ids": [
             "https://openalex.org/I1286329397"
           ]
         }
       ]
     },
     {
       "author_position": "middle",
       "author": {
         "id": "https://openalex.org/A5014549931",
         "display_name": "Michael L. Casazza",
         "orcid": "https://orcid.org/0000-0002-5636-735X"
       },
       "institutions": [
         {
           "id": "https://openalex.org/I1286329397",
           "display_name": "United States Geological Survey",
           "ror": "https://ror.org/035a68863",
           "country_code": "US",
           "type": "government",
           "lineage": [
             "https://openalex.org/I1286329397",
             "https://openalex.org/I1335927249"
           ]
         }
       ],
       "countries": [
         "US"
       ],
       "is_corresponding": false,
       "raw_author_name": "Michael L Casazza",
       "raw_affiliation_strings": [
         "US Geological Survey, Western Ecological Research Center, Dixon Field Station, 800 Business Park Drive, Suite D, Dixon, CA 95620, USA"
       ],
       "affiliations": [
         {
           "raw_affiliation_string": "US Geological Survey, Western Ecological Research Center, Dixon Field Station, 800 Business Park Drive, Suite D, Dixon, CA 95620, USA",
           "institution_ids": [
             "https://openalex.org/I1286329397"
           ]
         }
       ]
     },
     {
       "author_position": "middle",
       "author": {
         "id": "https://openalex.org/A5021658060",
         "display_name": "Joshua T. Ackerman",
         "orcid": "https://orcid.org/0000-0002-3074-8322"
       },
       "institutions": [
         {
           "id": "https://openalex.org/I1286329397",
           "display_name": "United States Geological Survey",
           "ror": "https://ror.org/035a68863",
           "country_code": "US",
           "type": "government",
           "lineage": [
             "https://openalex.org/I1286329397",
             "https://openalex.org/I1335927249"
           ]
         }
       ],
       "countries": [
         "US"
       ],
       "is_corresponding": false,
       "raw_author_name": "Joshua T Ackerman",
       "raw_affiliation_strings": [
         "US Geological Survey, Western Ecological Research Center, Dixon Field Station, 800 Business Park Drive, Suite D, Dixon, CA 95620, USA"
       ],
       "affiliations": [
         {
           "raw_affiliation_string": "US Geological Survey, Western Ecological Research Center, Dixon Field Station, 800 Business Park Drive, Suite D, Dixon, CA 95620, USA",
           "institution_ids": [
             "https://openalex.org/I1286329397"
           ]
         }
       ]
     },
     {
       "author_position": "middle",
       "author": {
         "id": "https://openalex.org/A5061003121",
         "display_name": "Joseph P. Fleskes",
         "orcid": "https://orcid.org/0000-0001-5388-6675"
       },
       "institutions": [
         {
           "id": "https://openalex.org/I1286329397",
           "display_name": "United States Geological Survey",
           "ror": "https://ror.org/035a68863",
           "country_code": "US",
           "type": "government",
           "lineage": [
             "https://openalex.org/I1286329397",
             "https://openalex.org/I1335927249"
           ]
         }
       ],
       "countries": [
         "US"
       ],
       "is_corresponding": false,
       "raw_author_name": "Joseph P Fleskes",
       "raw_affiliation_strings": [
         "US Geological Survey, Western Ecological Research Center, Dixon Field Station, 800 Business Park Drive, Suite D, Dixon, CA 95620, USA"
       ],
       "affiliations": [
         {
           "raw_affiliation_string": "US Geological Survey, Western Ecological Research Center, Dixon Field Station, 800 Business Park Drive, Suite D, Dixon, CA 95620, USA",
           "institution_ids": [
             "https://openalex.org/I1286329397"
           ]
         }
       ]
     },
     {
       "author_position": "middle",
       "author": {
         "id": "https://openalex.org/A5000212531",
         "display_name": "T. Winston Vickers",
         "orcid": "https://orcid.org/0000-0002-7004-3394"
       },
       "institutions": [
         {
           "id": "https://openalex.org/I84218800",
           "display_name": "University of California, Davis",
           "ror": "https://ror.org/05rrcem69",
           "country_code": "US",
           "type": "education",
           "lineage": [
             "https://openalex.org/I84218800"
           ]
         }
       ],
       "countries": [
         "US"
       ],
       "is_corresponding": false,
       "raw_author_name": "T Winston Vickers",
       "raw_affiliation_strings": [
         "School of Veterinary Medicine, Wildlife Health CenterUniversity of California Davis, One Shields Avenue, Davis, CA 95616, USA"
       ],
       "affiliations": [
         {
           "raw_affiliation_string": "School of Veterinary Medicine, Wildlife Health CenterUniversity of California Davis, One Shields Avenue, Davis, CA 95616, USA",
           "institution_ids": [
             "https://openalex.org/I84218800"
           ]
         }
       ]
     },
     {
       "author_position": "middle",
       "author": {
         "id": "https://openalex.org/A5090349728",
         "display_name": "Andrew B. Reeves",
         "orcid": "https://orcid.org/0000-0002-7526-0726"
       },
       "institutions": [
         {
           "id": "https://openalex.org/I1286329397",
           "display_name": "United States Geological Survey",
           "ror": "https://ror.org/035a68863",
           "country_code": "US",
           "type": "government",
           "lineage": [
             "https://openalex.org/I1286329397",
             "https://openalex.org/I1335927249"
           ]
         }
       ],
       "countries": [
         "US"
       ],
       "is_corresponding": false,
       "raw_author_name": "Andrew B Reeves",
       "raw_affiliation_strings": [
         "US Geological Survey, Alaska Science Center, 4210 University Drive, Anchorage, AK 99508, USA"
       ],
       "affiliations": [
         {
           "raw_affiliation_string": "US Geological Survey, Alaska Science Center, 4210 University Drive, Anchorage, AK 99508, USA",
           "institution_ids": [
             "https://openalex.org/I1286329397"
           ]
         }
       ]
     },
     {
       "author_position": "middle",
       "author": {
         "id": "https://openalex.org/A5080356709",
         "display_name": "Frances M. D. Gulland",
         "orcid": "https://orcid.org/0000-0002-6416-0156"
       },
       "institutions": [
         {
           "id": "https://openalex.org/I124104796",
           "display_name": "Marine Mammal Center",
           "ror": "https://ror.org/01wbbse44",
           "country_code": "US",
           "type": "nonprofit",
           "lineage": [
             "https://openalex.org/I124104796"
           ]
         }
       ],
       "countries": [
         "US"
       ],
       "is_corresponding": false,
       "raw_author_name": "Frances Gulland",
       "raw_affiliation_strings": [
         "The Marine Mammal Center, 2000 Bunker Road, Sausalito, CA 94965, USA"
       ],
       "affiliations": [
         {
           "raw_affiliation_string": "The Marine Mammal Center, 2000 Bunker Road, Sausalito, CA 94965, USA",
           "institution_ids": [
             "https://openalex.org/I124104796"
           ]
         }
       ]
     },
     {
       "author_position": "middle",
       "author": {
         "id": "https://openalex.org/A5031386635",
         "display_name": "Christine Fontaine",
         "orcid": null
       },
       "institutions": [
         {
           "id": "https://openalex.org/I124104796",
           "display_name": "Marine Mammal Center",
           "ror": "https://ror.org/01wbbse44",
           "country_code": "US",
           "type": "nonprofit",
           "lineage": [
             "https://openalex.org/I124104796"
           ]
         }
       ],
       "countries": [
         "US"
       ],
       "is_corresponding": false,
       "raw_author_name": "Christine Fontaine",
       "raw_affiliation_strings": [
         "The Marine Mammal Center, 2000 Bunker Road, Sausalito, CA 94965, USA"
       ],
       "affiliations": [
         {
           "raw_affiliation_string": "The Marine Mammal Center, 2000 Bunker Road, Sausalito, CA 94965, USA",
           "institution_ids": [
             "https://openalex.org/I124104796"
           ]
         }
       ]
     },
     {
       "author_position": "middle",
       "author": {
         "id": "https://openalex.org/A5038381085",
         "display_name": "Diann J. Prosser",
         "orcid": "https://orcid.org/0000-0002-5251-1799"
       },
       "institutions": [
         {
           "id": "https://openalex.org/I1286329397",
           "display_name": "United States Geological Survey",
           "ror": "https://ror.org/035a68863",
           "country_code": "US",
           "type": "government",
           "lineage": [
             "https://openalex.org/I1286329397",
             "https://openalex.org/I1335927249"
           ]
         }
       ],
       "countries": [
         "US"
       ],
       "is_corresponding": false,
       "raw_author_name": "Diann J Prosser",
       "raw_affiliation_strings": [
         "US Geological Survey, Patuxent Wildlife Research Center, Beltsville Lab, 10300 Baltimore Avenue, Beltsville, MD 20705, USA"
       ],
       "affiliations": [
         {
           "raw_affiliation_string": "US Geological Survey, Patuxent Wildlife Research Center, Beltsville Lab, 10300 Baltimore Avenue, Beltsville, MD 20705, USA",
           "institution_ids": [
             "https://openalex.org/I1286329397"
           ]
         }
       ]
     },
     {
       "author_position": "middle",
       "author": {
         "id": "https://openalex.org/A5008153289",
         "display_name": "Jonathan A. Runstadler",
         "orcid": "https://orcid.org/0000-0002-6747-7765"
       },
       "institutions": [
         {
           "id": "https://openalex.org/I63966007",
           "display_name": "Massachusetts Institute of Technology",
           "ror": "https://ror.org/042nb2s44",
           "country_code": "US",
           "type": "education",
           "lineage": [
             "https://openalex.org/I63966007"
           ]
         }
       ],
       "countries": [
         "US"
       ],
       "is_corresponding": false,
       "raw_author_name": "Jonathan A Runstadler",
       "raw_affiliation_strings": [
         "Massachusetts Institute of Technology, Cambridge, MA 02139, USA"
       ],
       "affiliations": [
         {
           "raw_affiliation_string": "Massachusetts Institute of Technology, Cambridge, MA 02139, USA",
           "institution_ids": [
             "https://openalex.org/I63966007"
           ]
         }
       ]
     },
     {
       "author_position": "last",
       "author": {
         "id": "https://openalex.org/A5026213531",
         "display_name": "Walter M. Boyce",
         "orcid": "https://orcid.org/0000-0002-0110-5854"
       },
       "institutions": [
         {
           "id": "https://openalex.org/I84218800",
           "display_name": "University of California, Davis",
           "ror": "https://ror.org/05rrcem69",
           "country_code": "US",
           "type": "education",
           "lineage": [
             "https://openalex.org/I84218800"
           ]
         }
       ],
       "countries": [
         "US"
       ],
       "is_corresponding": true,
       "raw_author_name": "Walter M Boyce",
       "raw_affiliation_strings": [
         "School of Veterinary Medicine, Wildlife Health CenterUniversity of California Davis, One Shields Avenue, Davis, CA 95616, USA"
       ],
       "affiliations": [
         {
           "raw_affiliation_string": "School of Veterinary Medicine, Wildlife Health CenterUniversity of California Davis, One Shields Avenue, Davis, CA 95616, USA",
           "institution_ids": [
             "https://openalex.org/I84218800"
           ]
         }
       ]
     }
   ],
   "best_oa_location": {
     "is_oa": true,
     "landing_page_url": "https://doi.org/10.1038/emi.2017.66",
     "pdf_url": "https://www.tandfonline.com/doi/pdf/10.1038/emi.2017.66?needAccess=true",
     "source": {
       "id": "https://openalex.org/S2764760790",
       "display_name": "Emerging Microbes & Infections",
       "issn_l": "2222-1751",
       "issn": [
         "2222-1751"
       ],
       "is_oa": true,
       "is_in_doaj": true,
       "is_core": true,
       "host_organization": "https://openalex.org/P4310320547",
       "host_organization_name": "Taylor & Francis",
       "host_organization_lineage": [
         "https://openalex.org/P4310320547"
       ],
       "host_organization_lineage_names": [
         "Taylor & Francis"
       ],
       "type": "journal"
     },
     "license": "cc-by",
     "license_id": "https://openalex.org/licenses/cc-by",
     "version": "publishedVersion",
     "is_accepted": true,
     "is_published": true
   },
   "biblio": {
     "volume": "6",
     "issue": "1",
     "first_page": "1",
     "last_page": "10"
   },
   "citation_normalized_percentile": {
     "value": 0.890929,
     "is_in_top_1_percent": false,
     "is_in_top_10_percent": false
   },
   "cited_by_api_url": "https://api.openalex.org/works?filter=cites:W2751591718",
   "cited_by_count": 16,
   "cited_by_percentile_year": {
     "min": 90,
     "max": 91
   },
   "concepts": [
     {
       "id": "https://openalex.org/C2778132209",
       "wikidata": "https://www.wikidata.org/wiki/Q5463697",
       "display_name": "Flyway",
       "level": 3,
       "score": 0.917806
     },
     {
       "id": "https://openalex.org/C86803240",
       "wikidata": "https://www.wikidata.org/wiki/Q420",
       "display_name": "Biology",
       "level": 0,
       "score": 0.8134763
     },
     {
       "id": "https://openalex.org/C2776834261",
       "wikidata": "https://www.wikidata.org/wiki/Q21651",
       "display_name": "Waterfowl",
       "level": 3,
       "score": 0.8134333
     },
     {
       "id": "https://openalex.org/C2778378574",
       "wikidata": "https://www.wikidata.org/wiki/Q214264",
       "display_name": "Anas",
       "level": 2,
       "score": 0.7375425
     },
     {
       "id": "https://openalex.org/C44465124",
       "wikidata": "https://www.wikidata.org/wiki/Q713623",
       "display_name": "Clade",
       "level": 4,
       "score": 0.67843246
     },
     {
       "id": "https://openalex.org/C519248777",
       "wikidata": "https://www.wikidata.org/wiki/Q160122",
       "display_name": "Influenza A virus subtype H5N1",
       "level": 3,
       "score": 0.6278124
     },
     {
       "id": "https://openalex.org/C2777546802",
       "wikidata": "https://www.wikidata.org/wiki/Q834390",
       "display_name": "Influenza A virus",
       "level": 3,
       "score": 0.5703542
     },
     {
       "id": "https://openalex.org/C193252679",
       "wikidata": "https://www.wikidata.org/wiki/Q242125",
       "display_name": "Phylogenetic tree",
       "level": 3,
       "score": 0.5564933
     },
     {
       "id": "https://openalex.org/C16154277",
       "wikidata": "https://www.wikidata.org/wiki/Q2004399",
       "display_name": "Reassortment",
       "level": 5,
       "score": 0.49160418
     },
     {
       "id": "https://openalex.org/C90132467",
       "wikidata": "https://www.wikidata.org/wiki/Q171184",
       "display_name": "Phylogenetics",
       "level": 3,
       "score": 0.4518839
     },
     {
       "id": "https://openalex.org/C159047783",
       "wikidata": "https://www.wikidata.org/wiki/Q7215",
       "display_name": "Virology",
       "level": 1,
       "score": 0.43801504
     },
     {
       "id": "https://openalex.org/C89623803",
       "wikidata": "https://www.wikidata.org/wiki/Q12184",
       "display_name": "Pandemic",
       "level": 5,
       "score": 0.43481165
     },
     {
       "id": "https://openalex.org/C2780543054",
       "wikidata": "https://www.wikidata.org/wiki/Q21651",
       "display_name": "Anseriformes",
       "level": 2,
       "score": 0.4280905
     },
     {
       "id": "https://openalex.org/C54355233",
       "wikidata": "https://www.wikidata.org/wiki/Q7162",
       "display_name": "Genetics",
       "level": 1,
       "score": 0.31303102
     },
     {
       "id": "https://openalex.org/C104317684",
       "wikidata": "https://www.wikidata.org/wiki/Q7187",
       "display_name": "Gene",
       "level": 2,
       "score": 0.30034524
     },
     {
       "id": "https://openalex.org/C2522874641",
       "wikidata": "https://www.wikidata.org/wiki/Q808",
       "display_name": "Virus",
       "level": 2,
       "score": 0.2714548
     },
     {
       "id": "https://openalex.org/C90856448",
       "wikidata": "https://www.wikidata.org/wiki/Q431",
       "display_name": "Zoology",
       "level": 1,
       "score": 0.26696187
     },
     {
       "id": "https://openalex.org/C18903297",
       "wikidata": "https://www.wikidata.org/wiki/Q7150",
       "display_name": "Ecology",
       "level": 1,
       "score": 0.22721002
     },
     {
       "id": "https://openalex.org/C3008058167",
       "wikidata": "https://www.wikidata.org/wiki/Q84263196",
       "display_name": "Coronavirus disease 2019 (COVID-19)",
       "level": 4,
       "score": 0.19599804
     },
     {
       "id": "https://openalex.org/C71924100",
       "wikidata": "https://www.wikidata.org/wiki/Q11190",
       "display_name": "Medicine",
       "level": 0,
       "score": 0.0
     },
     {
       "id": "https://openalex.org/C2779134260",
       "wikidata": "https://www.wikidata.org/wiki/Q12136",
       "display_name": "Disease",
       "level": 2,
       "score": 0.0
     },
     {
       "id": "https://openalex.org/C142724271",
       "wikidata": "https://www.wikidata.org/wiki/Q7208",
       "display_name": "Pathology",
       "level": 1,
       "score": 0.0
     },
     {
       "id": "https://openalex.org/C185933670",
       "wikidata": "https://www.wikidata.org/wiki/Q52105",
       "display_name": "Habitat",
       "level": 2,
       "score": 0.0
     },
     {
       "id": "https://openalex.org/C524204448",
       "wikidata": "https://www.wikidata.org/wiki/Q788926",
       "display_name": "Infectious disease (medical specialty)",
       "level": 3,
       "score": 0.0
     }
   ],
   "corresponding_author_ids": [
     "https://openalex.org/A5020992395",
     "https://openalex.org/A5026213531"
   ],
   "corresponding_institution_ids": [
     "https://openalex.org/I1286329397",
     "https://openalex.org/I84218800"
   ],
   "countries_distinct_count": 1,
   "counts_by_year": [
     {
       "year": 2024,
       "cited_by_count": 2
     },
     {
       "year": 2023,
       "cited_by_count": 2
     },
     {
       "year": 2022,
       "cited_by_count": 2
     },
     {
       "year": 2021,
       "cited_by_count": 3
     },
     {
       "year": 2020,
       "cited_by_count": 4
     },
     {
       "year": 2019,
       "cited_by_count": 1
     },
     {
       "year": 2018,
       "cited_by_count": 2
     }
   ],
   "created_date": "2017-09-15",
   "datasets": [],
   "display_name": "Surveillance for highly pathogenic influenza A viruses in California during 2014\u20132015 provides insights into viral evolutionary pathways and the spatiotemporal extent of viruses in the Pacific Americas Flyway",
   "doi": "https://doi.org/10.1038/emi.2017.66",
   "fulltext_origin": "ngrams",
   "fwci": 1.393,
   "grants": [],
   "has_fulltext": true,
   "id": "https://openalex.org/W2751591718",
   "ids": {
     "openalex": "https://openalex.org/W2751591718",
     "doi": "https://doi.org/10.1038/emi.2017.66",
     "mag": "2751591718",
     "pmid": "https://pubmed.ncbi.nlm.nih.gov/28874792",
     "pmcid": "https://www.ncbi.nlm.nih.gov/pmc/articles/5625317"
   },
   "indexed_in": [
     "crossref",
     "pubmed"
   ],
   "institutions_distinct_count": 5,
   "is_paratext": false,
   "is_retracted": false,
   "keywords": [
     {
       "id": "https://openalex.org/keywords/flyway",
       "display_name": "Flyway",
       "score": 0.917806
     },
     {
       "id": "https://openalex.org/keywords/anas",
       "display_name": "Anas",
       "score": 0.7375425
     },
     {
       "id": "https://openalex.org/keywords/reassortment",
       "display_name": "Reassortment",
       "score": 0.49160418
     },
     {
       "id": "https://openalex.org/keywords/pandemic",
       "display_name": "Pandemic",
       "score": 0.43481165
     },
     {
       "id": "https://openalex.org/keywords/pathogenesis",
       "display_name": "Pathogenesis",
       "score": 0.42872
     },
     {
       "id": "https://openalex.org/keywords/anseriformes",
       "display_name": "Anseriformes",
       "score": 0.4280905
     }
   ],
   "language": "en",
   "locations": [
     {
       "is_oa": true,
       "landing_page_url": "https://doi.org/10.1038/emi.2017.66",
       "pdf_url": "https://www.tandfonline.com/doi/pdf/10.1038/emi.2017.66?needAccess=true",
       "source": {
         "id": "https://openalex.org/S2764760790",
         "display_name": "Emerging Microbes & Infections",
         "issn_l": "2222-1751",
         "issn": [
           "2222-1751"
         ],
         "is_oa": true,
         "is_in_doaj": true,
         "is_core": true,
         "host_organization": "https://openalex.org/P4310320547",
         "host_organization_name": "Taylor & Francis",
         "host_organization_lineage": [
           "https://openalex.org/P4310320547"
         ],
         "host_organization_lineage_names": [
           "Taylor & Francis"
         ],
         "type": "journal"
       },
       "license": "cc-by",
       "license_id": "https://openalex.org/licenses/cc-by",
       "version": "publishedVersion",
       "is_accepted": true,
       "is_published": true
     },
     {
       "is_oa": true,
       "landing_page_url": "https://europepmc.org/articles/pmc5625317",
       "pdf_url": "https://europepmc.org/articles/pmc5625317?pdf=render",
       "source": {
         "id": "https://openalex.org/S4306400806",
         "display_name": "Europe PMC (PubMed Central)",
         "issn_l": null,
         "issn": null,
         "is_oa": true,
         "is_in_doaj": false,
         "is_core": false,
         "host_organization": "https://openalex.org/I1303153112",
         "host_organization_name": "European Bioinformatics Institute",
         "host_organization_lineage": [
           "https://openalex.org/I1303153112"
         ],
         "host_organization_lineage_names": [
           "European Bioinformatics Institute"
         ],
         "type": "repository"
       },
       "license": "cc-by",
       "license_id": "https://openalex.org/licenses/cc-by",
       "version": "publishedVersion",
       "is_accepted": true,
       "is_published": true
     },
     {
       "is_oa": true,
       "landing_page_url": "https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5625317",
       "pdf_url": null,
       "source": {
         "id": "https://openalex.org/S2764455111",
         "display_name": "PubMed Central",
         "issn_l": null,
         "issn": null,
         "is_oa": true,
         "is_in_doaj": false,
         "is_core": false,
         "host_organization": "https://openalex.org/I1299303238",
         "host_organization_name": "National Institutes of Health",
         "host_organization_lineage": [
           "https://openalex.org/I1299303238"
         ],
         "host_organization_lineage_names": [
           "National Institutes of Health"
         ],
         "type": "repository"
       },
       "license": null,
       "license_id": null,
       "version": "publishedVersion",
       "is_accepted": true,
       "is_published": true
     },
     {
       "is_oa": true,
       "landing_page_url": "https://escholarship.org/uc/item/1pc748f8",
       "pdf_url": "https://escholarship.org/content/qt1pc748f8/qt1pc748f8.pdf?t=qbyfgr",
       "source": {
         "id": "https://openalex.org/S4306400115",
         "display_name": "eScholarship (California Digital Library)",
         "issn_l": null,
         "issn": null,
         "is_oa": true,
         "is_in_doaj": false,
         "is_core": false,
         "host_organization": "https://openalex.org/I2801248553",
         "host_organization_name": "California Digital Library",
         "host_organization_lineage": [
           "https://openalex.org/I2801248553"
         ],
         "host_organization_lineage_names": [
           "California Digital Library"
         ],
         "type": "repository"
       },
       "license": "cc-by",
       "license_id": "https://openalex.org/licenses/cc-by",
       "version": "submittedVersion",
       "is_accepted": false,
       "is_published": false
     },
     {
       "is_oa": false,
       "landing_page_url": "https://pubmed.ncbi.nlm.nih.gov/28874792",
       "pdf_url": null,
       "source": {
         "id": "https://openalex.org/S4306525036",
         "display_name": "PubMed",
         "issn_l": null,
         "issn": null,
         "is_oa": false,
         "is_in_doaj": false,
         "is_core": false,
         "host_organization": "https://openalex.org/I1299303238",
         "host_organization_name": "National Institutes of Health",
         "host_organization_lineage": [
           "https://openalex.org/I1299303238"
         ],
         "host_organization_lineage_names": [
           "National Institutes of Health"
         ],
         "type": "repository"
       },
       "license": null,
       "license_id": null,
       "version": null,
       "is_accepted": false,
       "is_published": false
     }
   ],
   "locations_count": 5,
   "mesh": [
     {
       "descriptor_ui": "D001717",
       "descriptor_name": "Birds",
       "qualifier_ui": "Q000821",
       "qualifier_name": "virology",
       "is_major_topic": true
     },
     {
       "descriptor_ui": "D010872",
       "descriptor_name": "Caniformia",
       "qualifier_ui": "Q000821",
       "qualifier_name": "virology",
       "is_major_topic": true
     },
     {
       "descriptor_ui": "D062665",
       "descriptor_name": "Epidemiological Monitoring",
       "qualifier_ui": "Q000662",
       "qualifier_name": "veterinary",
       "is_major_topic": true
     },
     {
       "descriptor_ui": "D053124",
       "descriptor_name": "Influenza A Virus, H5N1 Subtype",
       "qualifier_ui": "Q000235",
       "qualifier_name": "genetics",
       "is_major_topic": true
     },
     {
       "descriptor_ui": "D005585",
       "descriptor_name": "Influenza in Birds",
       "qualifier_ui": "Q000453",
       "qualifier_name": "epidemiology",
       "is_major_topic": true
     },
     {
       "descriptor_ui": "D005585",
       "descriptor_name": "Influenza in Birds",
       "qualifier_ui": "Q000635",
       "qualifier_name": "transmission",
       "is_major_topic": true
     },
     {
       "descriptor_ui": "D009976",
       "descriptor_name": "Orthomyxoviridae Infections",
       "qualifier_ui": "Q000662",
       "qualifier_name": "veterinary",
       "is_major_topic": true
     },
     {
       "descriptor_ui": "D000569",
       "descriptor_name": "Americas",
       "qualifier_ui": "Q000453",
       "qualifier_name": "epidemiology",
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D000569",
       "descriptor_name": "Americas",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D000818",
       "descriptor_name": "Animals",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D001717",
       "descriptor_name": "Birds",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D002140",
       "descriptor_name": "California",
       "qualifier_ui": "Q000453",
       "qualifier_name": "epidemiology",
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D002140",
       "descriptor_name": "California",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D002170",
       "descriptor_name": "Canada",
       "qualifier_ui": "Q000453",
       "qualifier_name": "epidemiology",
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D002170",
       "descriptor_name": "Canada",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D010872",
       "descriptor_name": "Caniformia",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D004196",
       "descriptor_name": "Disease Outbreaks",
       "qualifier_ui": "Q000662",
       "qualifier_name": "veterinary",
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D004196",
       "descriptor_name": "Disease Outbreaks",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D062665",
       "descriptor_name": "Epidemiological Monitoring",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D019143",
       "descriptor_name": "Evolution, Molecular",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D016679",
       "descriptor_name": "Genome, Viral",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D053124",
       "descriptor_name": "Influenza A Virus, H5N1 Subtype",
       "qualifier_ui": "Q000302",
       "qualifier_name": "isolation & purification",
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D053124",
       "descriptor_name": "Influenza A Virus, H5N1 Subtype",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D009980",
       "descriptor_name": "Influenza A virus",
       "qualifier_ui": "Q000472",
       "qualifier_name": "pathogenicity",
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D009980",
       "descriptor_name": "Influenza A virus",
       "qualifier_ui": "Q000302",
       "qualifier_name": "isolation & purification",
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D009980",
       "descriptor_name": "Influenza A virus",
       "qualifier_ui": "Q000235",
       "qualifier_name": "genetics",
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D009980",
       "descriptor_name": "Influenza A virus",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D005585",
       "descriptor_name": "Influenza in Birds",
       "qualifier_ui": "Q000821",
       "qualifier_name": "virology",
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D005585",
       "descriptor_name": "Influenza in Birds",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D009976",
       "descriptor_name": "Orthomyxoviridae Infections",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D009976",
       "descriptor_name": "Orthomyxoviridae Infections",
       "qualifier_ui": "Q000453",
       "qualifier_name": "epidemiology",
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D009976",
       "descriptor_name": "Orthomyxoviridae Infections",
       "qualifier_ui": "Q000821",
       "qualifier_name": "virology",
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D010802",
       "descriptor_name": "Phylogeny",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D016865",
       "descriptor_name": "Reassortant Viruses",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D017422",
       "descriptor_name": "Sequence Analysis, DNA",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     },
     {
       "descriptor_ui": "D062211",
       "descriptor_name": "Spatio-Temporal Analysis",
       "qualifier_ui": "",
       "qualifier_name": null,
       "is_major_topic": false
     }
   ],
   "ngrams_url": "https://api.openalex.org/works/W2751591718/ngrams",
   "open_access": {
     "is_oa": true,
     "oa_status": "gold",
     "oa_url": "https://www.tandfonline.com/doi/pdf/10.1038/emi.2017.66?needAccess=true",
     "any_repository_has_fulltext": true
   },
   "primary_location": {
     "is_oa": true,
     "landing_page_url": "https://doi.org/10.1038/emi.2017.66",
     "pdf_url": "https://www.tandfonline.com/doi/pdf/10.1038/emi.2017.66?needAccess=true",
     "source": {
       "id": "https://openalex.org/S2764760790",
       "display_name": "Emerging Microbes & Infections",
       "issn_l": "2222-1751",
       "issn": [
         "2222-1751"
       ],
       "is_oa": true,
       "is_in_doaj": true,
       "is_core": true,
       "host_organization": "https://openalex.org/P4310320547",
       "host_organization_name": "Taylor & Francis",
       "host_organization_lineage": [
         "https://openalex.org/P4310320547"
       ],
       "host_organization_lineage_names": [
         "Taylor & Francis"
       ],
       "type": "journal"
     },
     "license": "cc-by",
     "license_id": "https://openalex.org/licenses/cc-by",
     "version": "publishedVersion",
     "is_accepted": true,
     "is_published": true
   },
   "primary_topic": {
     "id": "https://openalex.org/T10167",
     "display_name": "Influenza Virus Research and Epidemiology",
     "score": 1.0,
     "subfield": {
       "id": "https://openalex.org/subfields/2713",
       "display_name": "Epidemiology"
     },
     "field": {
       "id": "https://openalex.org/fields/27",
       "display_name": "Medicine"
     },
     "domain": {
       "id": "https://openalex.org/domains/4",
       "display_name": "Health Sciences"
     }
   },
   "publication_date": "2017-01-01",
   "publication_year": 2017,
   "referenced_works": [
     "https://openalex.org/W1965298203",
     "https://openalex.org/W1976852215",
     "https://openalex.org/W1987052745",
     "https://openalex.org/W1988399931",
     "https://openalex.org/W1988533731",
     "https://openalex.org/W1992510841",
     "https://openalex.org/W2009695213",
     "https://openalex.org/W2011935686",
     "https://openalex.org/W2017387306",
     "https://openalex.org/W2019111395",
     "https://openalex.org/W2022228035",
     "https://openalex.org/W2047179515",
     "https://openalex.org/W2055544485",
     "https://openalex.org/W2056584399",
     "https://openalex.org/W2060970016",
     "https://openalex.org/W2080315060",
     "https://openalex.org/W2091473676",
     "https://openalex.org/W2110832962",
     "https://openalex.org/W2110835349",
     "https://openalex.org/W2115978199",
     "https://openalex.org/W2124352372",
     "https://openalex.org/W2128880918",
     "https://openalex.org/W2130362098",
     "https://openalex.org/W2132926880",
     "https://openalex.org/W2140511510",
     "https://openalex.org/W2143606694",
     "https://openalex.org/W2155962399",
     "https://openalex.org/W2158989551",
     "https://openalex.org/W2168696662",
     "https://openalex.org/W2291738852",
     "https://openalex.org/W2310429658",
     "https://openalex.org/W2410276431",
     "https://openalex.org/W2464779428",
     "https://openalex.org/W2468716399",
     "https://openalex.org/W2495987436",
     "https://openalex.org/W2497905206",
     "https://openalex.org/W2508008679",
     "https://openalex.org/W2520903201",
     "https://openalex.org/W2538556746",
     "https://openalex.org/W2557499142",
     "https://openalex.org/W2570621318",
     "https://openalex.org/W2616854082"
   ],
   "referenced_works_count": 42,
   "related_works": [
     "https://openalex.org/W4281619908",
     "https://openalex.org/W2901123475",
     "https://openalex.org/W2111431231",
     "https://openalex.org/W2100836052",
     "https://openalex.org/W2094291640",
     "https://openalex.org/W2056229802",
     "https://openalex.org/W2028960431",
     "https://openalex.org/W2008443162",
     "https://openalex.org/W1970368490",
     "https://openalex.org/W1797286602"
   ],
   "sustainable_development_goals": [
     {
       "score": 0.88,
       "display_name": "Life below water",
       "id": "https://metadata.un.org/sdg/14"
     }
   ],
   "title": "Surveillance for highly pathogenic influenza A viruses in California during 2014\u20132015 provides insights into viral evolutionary pathways and the spatiotemporal extent of viruses in the Pacific Americas Flyway",
   "topics": [
     {
       "id": "https://openalex.org/T10167",
       "display_name": "Influenza Virus Research and Epidemiology",
       "score": 1.0,
       "subfield": {
         "id": "https://openalex.org/subfields/2713",
         "display_name": "Epidemiology"
       },
       "field": {
         "id": "https://openalex.org/fields/27",
         "display_name": "Medicine"
       },
       "domain": {
         "id": "https://openalex.org/domains/4",
         "display_name": "Health Sciences"
       }
     },
     {
       "id": "https://openalex.org/T11495",
       "display_name": "Viral Diseases in Livestock and Poultry",
       "score": 0.981,
       "subfield": {
         "id": "https://openalex.org/subfields/1103",
         "display_name": "Animal Science and Zoology"
       },
       "field": {
         "id": "https://openalex.org/fields/11",
         "display_name": "Agricultural and Biological Sciences"
       },
       "domain": {
         "id": "https://openalex.org/domains/1",
         "display_name": "Life Sciences"
       }
     },
     {
       "id": "https://openalex.org/T11668",
       "display_name": "Innate Immunity to Viral Infection",
       "score": 0.9738,
       "subfield": {
         "id": "https://openalex.org/subfields/2403",
         "display_name": "Immunology"
       },
       "field": {
         "id": "https://openalex.org/fields/24",
         "display_name": "Immunology and Microbiology"
       },
       "domain": {
         "id": "https://openalex.org/domains/1",
         "display_name": "Life Sciences"
       }
     }
   ],
   "type": "article",
   "type_crossref": "journal-article",
   "updated_date": "2024-08-08T18:41:04.620830",
   "versions": []
 }

}