Item talk:Q236019
From geokb
{
"USGS Publications Warehouse": {
"@context": "https://schema.org",
"@type": "Article",
"additionalType": "Journal Article",
"name": "Enrichment of Geobacter species in response to stimulation of Fe(III) reduction in sandy aquifer sediments",
"identifier": [
{
"@type": "PropertyValue",
"propertyID": "USGS Publications Warehouse IndexID",
"value": "70185231",
"url": "https://pubs.usgs.gov/publication/70185231"
},
{
"@type": "PropertyValue",
"propertyID": "USGS Publications Warehouse Internal ID",
"value": 70185231
},
{
"@type": "PropertyValue",
"propertyID": "DOI",
"value": "10.1007/s002480000018",
"url": "https://doi.org/10.1007/s002480000018"
}
],
"journal": {
"@type": "Periodical",
"name": "Microbial Ecology",
"volumeNumber": "39",
"issueNumber": "2"
},
"inLanguage": "en",
"isPartOf": [
{
"@type": "CreativeWorkSeries",
"name": "Microbial Ecology"
}
],
"datePublished": "2000",
"dateModified": "2017-03-16",
"abstract": "Engineered stimulation of Fe(III) has been proposed as a strategy to enhance the immobilization of radioactive and toxic metals in metal-contaminated subsurface environments. Therefore, laboratory and field studies were conducted to determine which microbial populations would respond to stimulation of Fe(III) reduction in the sediments of sandy aquifers. In laboratory studies, the addition of either various organic electron donors or electron shuttle compounds stimulated Fe(III) reduction and resulted in Geobacter sequences becoming important constituents of the Bacterial 16S rDNA sequences that could be detected with PCR amplification and denaturing gradient gel electrophoresis (DGGE). Quantification of Geobacteraceae sequences with a PCR most-probable-number technique indicated that the extent to which numbers of Geobacter increased was related to the degree of stimulation of Fe(III) reduction. Geothrix species were also enriched in some instances, but were orders of magnitude less numerous than Geobacter species. Shewanella species were not detected, even when organic compounds known to be electron donors for Shewanella species were used to stimulate Fe(III) reduction in the sediments. Geobacter species were also enriched in two field experiments in which Fe(III) reduction was stimulated with the addition of benzoate or aromatic hydrocarbons. The apparent growth of Geobacter species concurrent with increased Fe(III) reduction suggests that Geobacter species were responsible for much of the Fe(III) reduction in all of the stimulation approaches evaluated in three geographically distinct aquifers. Therefore, strategies for subsurface remediation that involve enhancing the activity of indigenous Fe(III)-reducing populations in aquifers should consider the physiological properties of Geobacter species in their treatment design.",
"description": "15 p.",
"publisher": {
"@type": "Organization",
"name": "Springer-Verlag "
},
"author": [
{
"@type": "Person",
"name": "Snoeyenbos-West, O.L.",
"givenName": "O.L.",
"familyName": "Snoeyenbos-West"
},
{
"@type": "Person",
"name": "Nevin, K.P.",
"givenName": "K.P.",
"familyName": "Nevin"
},
{
"@type": "Person",
"name": "Anderson, R. T.",
"givenName": "R. T.",
"familyName": "Anderson"
},
{
"@type": "Person",
"name": "Lovely, D.R.",
"givenName": "D.R.",
"familyName": "Lovely"
}
],
"funder": [
{
"@type": "Organization",
"name": "Toxic Substances Hydrology Program",
"url": null
}
]
},
"OpenAlex": {
"abstract_inverted_index": null,
"apc_list": {
"value": 3390,
"currency": "EUR",
"value_usd": 4390,
"provenance": "doaj"
},
"apc_paid": null,
"authorships": [
{
"author_position": "first",
"author": {
"id": "https://openalex.org/A5063531768",
"display_name": "Oona Snoeyenbos-West",
"orcid": "https://orcid.org/0000-0001-9146-7244"
},
"institutions": [
{
"id": "https://openalex.org/I24603500",
"display_name": "University of Massachusetts Amherst",
"ror": "https://ror.org/0072zz521",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I24603500"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "O.L. Snoeyenbos-West",
"raw_affiliation_strings": [
"Department of Microbiology, University of Massachusetts, Amherst, MA 01003, USA, , US"
],
"affiliations": [
{
"raw_affiliation_string": "Department of Microbiology, University of Massachusetts, Amherst, MA 01003, USA, , US",
"institution_ids": [
"https://openalex.org/I24603500"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5084796477",
"display_name": "Kelly P. Nevin",
"orcid": null
},
"institutions": [
{
"id": "https://openalex.org/I24603500",
"display_name": "University of Massachusetts Amherst",
"ror": "https://ror.org/0072zz521",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I24603500"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "K.P. Nevin",
"raw_affiliation_strings": [
"Department of Microbiology, University of Massachusetts, Amherst, MA 01003, USA, , US"
],
"affiliations": [
{
"raw_affiliation_string": "Department of Microbiology, University of Massachusetts, Amherst, MA 01003, USA, , US",
"institution_ids": [
"https://openalex.org/I24603500"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5062413047",
"display_name": "Robert Anderson",
"orcid": null
},
"institutions": [
{
"id": "https://openalex.org/I24603500",
"display_name": "University of Massachusetts Amherst",
"ror": "https://ror.org/0072zz521",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I24603500"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "R.T. Anderson",
"raw_affiliation_strings": [
"Department of Microbiology, University of Massachusetts, Amherst, MA 01003, USA, , US"
],
"affiliations": [
{
"raw_affiliation_string": "Department of Microbiology, University of Massachusetts, Amherst, MA 01003, USA, , US",
"institution_ids": [
"https://openalex.org/I24603500"
]
}
]
},
{
"author_position": "last",
"author": {
"id": "https://openalex.org/A5021568652",
"display_name": "Derek R. Lovley",
"orcid": "https://orcid.org/0000-0001-7158-3555"
},
"institutions": [
{
"id": "https://openalex.org/I24603500",
"display_name": "University of Massachusetts Amherst",
"ror": "https://ror.org/0072zz521",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I24603500"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "D.R. Lovley",
"raw_affiliation_strings": [
"Department of Microbiology, University of Massachusetts, Amherst, MA 01003, USA, , US"
],
"affiliations": [
{
"raw_affiliation_string": "Department of Microbiology, University of Massachusetts, Amherst, MA 01003, USA, , US",
"institution_ids": [
"https://openalex.org/I24603500"
]
}
]
}
],
"best_oa_location": null,
"biblio": {
"volume": "39",
"issue": "2",
"first_page": "153",
"last_page": "167"
},
"citation_normalized_percentile": {
"value": 0.999747,
"is_in_top_1_percent": true,
"is_in_top_10_percent": true
},
"cited_by_api_url": "https://api.openalex.org/works?filter=cites:W2093808818",
"cited_by_count": 266,
"cited_by_percentile_year": {
"min": 98,
"max": 99
},
"concepts": [
{
"id": "https://openalex.org/C2776062086",
"wikidata": "https://www.wikidata.org/wiki/Q1979991",
"display_name": "Geobacter",
"level": 4,
"score": 0.9170052
},
{
"id": "https://openalex.org/C2778824058",
"wikidata": "https://www.wikidata.org/wiki/Q3243676",
"display_name": "Shewanella",
"level": 3,
"score": 0.7471177
},
{
"id": "https://openalex.org/C107872376",
"wikidata": "https://www.wikidata.org/wiki/Q321355",
"display_name": "Environmental chemistry",
"level": 1,
"score": 0.58986264
},
{
"id": "https://openalex.org/C75622301",
"wikidata": "https://www.wikidata.org/wiki/Q208791",
"display_name": "Aquifer",
"level": 3,
"score": 0.5743218
},
{
"id": "https://openalex.org/C86803240",
"wikidata": "https://www.wikidata.org/wiki/Q420",
"display_name": "Biology",
"level": 0,
"score": 0.55464596
},
{
"id": "https://openalex.org/C522964758",
"wikidata": "https://www.wikidata.org/wiki/Q2019586",
"display_name": "Environmental remediation",
"level": 3,
"score": 0.5144313
},
{
"id": "https://openalex.org/C2778461760",
"wikidata": "https://www.wikidata.org/wiki/Q307535",
"display_name": "Deltaproteobacteria",
"level": 5,
"score": 0.5141321
},
{
"id": "https://openalex.org/C2779812452",
"wikidata": "https://www.wikidata.org/wiki/Q1502805",
"display_name": "Geobacter sulfurreducens",
"level": 4,
"score": 0.50910586
},
{
"id": "https://openalex.org/C2124996",
"wikidata": "https://www.wikidata.org/wiki/Q816441",
"display_name": "Bioremediation",
"level": 3,
"score": 0.48666054
},
{
"id": "https://openalex.org/C69562835",
"wikidata": "https://www.wikidata.org/wiki/Q3054637",
"display_name": "Microbial ecology",
"level": 3,
"score": 0.4442436
},
{
"id": "https://openalex.org/C81407943",
"wikidata": "https://www.wikidata.org/wiki/Q17149178",
"display_name": "Microbial population biology",
"level": 3,
"score": 0.433695
},
{
"id": "https://openalex.org/C2777107655",
"wikidata": "https://www.wikidata.org/wiki/Q15846377",
"display_name": "Desulfovibrio",
"level": 3,
"score": 0.42241853
},
{
"id": "https://openalex.org/C523546767",
"wikidata": "https://www.wikidata.org/wiki/Q10876",
"display_name": "Bacteria",
"level": 2,
"score": 0.40552554
},
{
"id": "https://openalex.org/C89423630",
"wikidata": "https://www.wikidata.org/wiki/Q7193",
"display_name": "Microbiology",
"level": 1,
"score": 0.39754573
},
{
"id": "https://openalex.org/C18903297",
"wikidata": "https://www.wikidata.org/wiki/Q7150",
"display_name": "Ecology",
"level": 1,
"score": 0.36223856
},
{
"id": "https://openalex.org/C42062724",
"wikidata": "https://www.wikidata.org/wiki/Q1209205",
"display_name": "16S ribosomal RNA",
"level": 3,
"score": 0.27574888
},
{
"id": "https://openalex.org/C185592680",
"wikidata": "https://www.wikidata.org/wiki/Q2329",
"display_name": "Chemistry",
"level": 0,
"score": 0.2663262
},
{
"id": "https://openalex.org/C112570922",
"wikidata": "https://www.wikidata.org/wiki/Q60528603",
"display_name": "Contamination",
"level": 2,
"score": 0.257906
},
{
"id": "https://openalex.org/C127313418",
"wikidata": "https://www.wikidata.org/wiki/Q1069",
"display_name": "Geology",
"level": 0,
"score": 0.17914179
},
{
"id": "https://openalex.org/C76177295",
"wikidata": "https://www.wikidata.org/wiki/Q161598",
"display_name": "Groundwater",
"level": 2,
"score": 0.14155468
},
{
"id": "https://openalex.org/C151730666",
"wikidata": "https://www.wikidata.org/wiki/Q7205",
"display_name": "Paleontology",
"level": 1,
"score": 0.10319072
},
{
"id": "https://openalex.org/C58123911",
"wikidata": "https://www.wikidata.org/wiki/Q467410",
"display_name": "Biofilm",
"level": 3,
"score": 0.06767756
},
{
"id": "https://openalex.org/C187320778",
"wikidata": "https://www.wikidata.org/wiki/Q1349130",
"display_name": "Geotechnical engineering",
"level": 1,
"score": 0.0
},
{
"id": "https://openalex.org/C2776989901",
"wikidata": "https://www.wikidata.org/wiki/Q134668",
"display_name": "Gammaproteobacteria",
"level": 4,
"score": 0.0
}
],
"corresponding_author_ids": [],
"corresponding_institution_ids": [],
"countries_distinct_count": 1,
"counts_by_year": [
{
"year": 2024,
"cited_by_count": 4
},
{
"year": 2023,
"cited_by_count": 2
},
{
"year": 2022,
"cited_by_count": 7
},
{
"year": 2021,
"cited_by_count": 7
},
{
"year": 2020,
"cited_by_count": 5
},
{
"year": 2019,
"cited_by_count": 11
},
{
"year": 2018,
"cited_by_count": 10
},
{
"year": 2017,
"cited_by_count": 5
},
{
"year": 2016,
"cited_by_count": 6
},
{
"year": 2015,
"cited_by_count": 10
},
{
"year": 2014,
"cited_by_count": 8
},
{
"year": 2013,
"cited_by_count": 10
},
{
"year": 2012,
"cited_by_count": 13
}
],
"created_date": "2016-06-24",
"datasets": [],
"display_name": "Enrichment of Geobacter Species in Response to Stimulation of Fe(III) Reduction in Sandy Aquifer Sediments",
"doi": "https://doi.org/10.1007/s002480000018",
"fulltext_origin": "ngrams",
"fwci": 11.346,
"grants": [],
"has_fulltext": true,
"id": "https://openalex.org/W2093808818",
"ids": {
"openalex": "https://openalex.org/W2093808818",
"doi": "https://doi.org/10.1007/s002480000018",
"mag": "2093808818",
"pmid": "https://pubmed.ncbi.nlm.nih.gov/10833228"
},
"indexed_in": [
"crossref",
"pubmed"
],
"institutions_distinct_count": 1,
"is_paratext": false,
"is_retracted": false,
"keywords": [
{
"id": "https://openalex.org/keywords/geobacter",
"display_name": "Geobacter",
"score": 0.9170052
},
{
"id": "https://openalex.org/keywords/shewanella",
"display_name": "Shewanella",
"score": 0.7471177
},
{
"id": "https://openalex.org/keywords/deltaproteobacteria",
"display_name": "Deltaproteobacteria",
"score": 0.5141321
},
{
"id": "https://openalex.org/keywords/geobacter-sulfurreducens",
"display_name": "Geobacter sulfurreducens",
"score": 0.50910586
},
{
"id": "https://openalex.org/keywords/shewanella-and-geobacter",
"display_name": "Shewanella and Geobacter",
"score": 0.468983
},
{
"id": "https://openalex.org/keywords/desulfovibrio",
"display_name": "Desulfovibrio",
"score": 0.42241853
}
],
"language": "en",
"locations": [
{
"is_oa": false,
"landing_page_url": "https://doi.org/10.1007/s002480000018",
"pdf_url": null,
"source": {
"id": "https://openalex.org/S97758720",
"display_name": "Microbial Ecology",
"issn_l": "0095-3628",
"issn": [
"0095-3628",
"1432-184X"
],
"is_oa": false,
"is_in_doaj": false,
"is_core": true,
"host_organization": "https://openalex.org/P4310319900",
"host_organization_name": "Springer Science+Business Media",
"host_organization_lineage": [
"https://openalex.org/P4310319965",
"https://openalex.org/P4310319900"
],
"host_organization_lineage_names": [
"Springer Nature",
"Springer Science+Business Media"
],
"type": "journal"
},
"license": null,
"license_id": null,
"version": null,
"is_accepted": false,
"is_published": false
},
{
"is_oa": false,
"landing_page_url": "https://pubmed.ncbi.nlm.nih.gov/10833228",
"pdf_url": null,
"source": {
"id": "https://openalex.org/S4306525036",
"display_name": "PubMed",
"issn_l": null,
"issn": null,
"is_oa": false,
"is_in_doaj": false,
"is_core": false,
"host_organization": "https://openalex.org/I1299303238",
"host_organization_name": "National Institutes of Health",
"host_organization_lineage": [
"https://openalex.org/I1299303238"
],
"host_organization_lineage_names": [
"National Institutes of Health"
],
"type": "repository"
},
"license": null,
"license_id": null,
"version": null,
"is_accepted": false,
"is_published": false
}
],
"locations_count": 2,
"mesh": [],
"ngrams_url": "https://api.openalex.org/works/W2093808818/ngrams",
"open_access": {
"is_oa": false,
"oa_status": "closed",
"oa_url": null,
"any_repository_has_fulltext": false
},
"primary_location": {
"is_oa": false,
"landing_page_url": "https://doi.org/10.1007/s002480000018",
"pdf_url": null,
"source": {
"id": "https://openalex.org/S97758720",
"display_name": "Microbial Ecology",
"issn_l": "0095-3628",
"issn": [
"0095-3628",
"1432-184X"
],
"is_oa": false,
"is_in_doaj": false,
"is_core": true,
"host_organization": "https://openalex.org/P4310319900",
"host_organization_name": "Springer Science+Business Media",
"host_organization_lineage": [
"https://openalex.org/P4310319965",
"https://openalex.org/P4310319900"
],
"host_organization_lineage_names": [
"Springer Nature",
"Springer Science+Business Media"
],
"type": "journal"
},
"license": null,
"license_id": null,
"version": null,
"is_accepted": false,
"is_published": false
},
"primary_topic": {
"id": "https://openalex.org/T10973",
"display_name": "Chemistry of Actinide and Lanthanide Elements",
"score": 0.9997,
"subfield": {
"id": "https://openalex.org/subfields/1604",
"display_name": "Inorganic Chemistry"
},
"field": {
"id": "https://openalex.org/fields/16",
"display_name": "Chemistry"
},
"domain": {
"id": "https://openalex.org/domains/3",
"display_name": "Physical Sciences"
}
},
"publication_date": "2000-02-21",
"publication_year": 2000,
"referenced_works": [
"https://openalex.org/W1493599431",
"https://openalex.org/W1518992342",
"https://openalex.org/W1551729926",
"https://openalex.org/W1560853515",
"https://openalex.org/W1569041852",
"https://openalex.org/W1577668470",
"https://openalex.org/W1604119329",
"https://openalex.org/W1671158507",
"https://openalex.org/W1688982642",
"https://openalex.org/W1701869895",
"https://openalex.org/W1965102600",
"https://openalex.org/W1979106645",
"https://openalex.org/W1988271230",
"https://openalex.org/W1990652770",
"https://openalex.org/W1994318446",
"https://openalex.org/W1996339982",
"https://openalex.org/W2005847815",
"https://openalex.org/W2010030147",
"https://openalex.org/W2015404609",
"https://openalex.org/W2018509042",
"https://openalex.org/W2031117559",
"https://openalex.org/W2046613707",
"https://openalex.org/W2049014668",
"https://openalex.org/W2055305007",
"https://openalex.org/W2057662687",
"https://openalex.org/W2059294660",
"https://openalex.org/W2072556768",
"https://openalex.org/W2072812562",
"https://openalex.org/W2074026361",
"https://openalex.org/W2086205193",
"https://openalex.org/W2087228613",
"https://openalex.org/W2099220816",
"https://openalex.org/W2099711252",
"https://openalex.org/W2108829880",
"https://openalex.org/W2111858111",
"https://openalex.org/W2115528621",
"https://openalex.org/W2125756844",
"https://openalex.org/W2131988453",
"https://openalex.org/W2142132096",
"https://openalex.org/W2150738554",
"https://openalex.org/W2156603342",
"https://openalex.org/W2162164680",
"https://openalex.org/W2171576431",
"https://openalex.org/W2171676024",
"https://openalex.org/W2328860610",
"https://openalex.org/W3217097258"
],
"referenced_works_count": 46,
"related_works": [
"https://openalex.org/W4291819617",
"https://openalex.org/W4200112818",
"https://openalex.org/W2972685305",
"https://openalex.org/W2540624051",
"https://openalex.org/W2183532664",
"https://openalex.org/W2149110469",
"https://openalex.org/W2123057945",
"https://openalex.org/W2093808818",
"https://openalex.org/W2092746354",
"https://openalex.org/W2088909698"
],
"sustainable_development_goals": [
{
"display_name": "Life below water",
"score": 0.4,
"id": "https://metadata.un.org/sdg/14"
}
],
"title": "Enrichment of Geobacter Species in Response to Stimulation of Fe(III) Reduction in Sandy Aquifer Sediments",
"topics": [
{
"id": "https://openalex.org/T10973",
"display_name": "Chemistry of Actinide and Lanthanide Elements",
"score": 0.9997,
"subfield": {
"id": "https://openalex.org/subfields/1604",
"display_name": "Inorganic Chemistry"
},
"field": {
"id": "https://openalex.org/fields/16",
"display_name": "Chemistry"
},
"domain": {
"id": "https://openalex.org/domains/3",
"display_name": "Physical Sciences"
}
},
{
"id": "https://openalex.org/T11231",
"display_name": "Microbial Fuel Cells and Electrogenic Bacteria Technology",
"score": 0.995,
"subfield": {
"id": "https://openalex.org/subfields/2305",
"display_name": "Environmental Engineering"
},
"field": {
"id": "https://openalex.org/fields/23",
"display_name": "Environmental Science"
},
"domain": {
"id": "https://openalex.org/domains/3",
"display_name": "Physical Sciences"
}
},
{
"id": "https://openalex.org/T11740",
"display_name": "Geochemistry of Manganese Oxides in Sedimentary Environments",
"score": 0.9922,
"subfield": {
"id": "https://openalex.org/subfields/1906",
"display_name": "Geochemistry and Petrology"
},
"field": {
"id": "https://openalex.org/fields/19",
"display_name": "Earth and Planetary Sciences"
},
"domain": {
"id": "https://openalex.org/domains/3",
"display_name": "Physical Sciences"
}
}
],
"type": "article",
"type_crossref": "journal-article",
"updated_date": "2024-08-15T09:05:32.340959",
"versions": []
}
}
