Item talk:Q304929
From geokb
{
"USGS Publications Warehouse": { "@context": "https://schema.org", "@type": "Article", "additionalType": "Journal Article", "name": "Comparison of microbiomes of cold-water corals Primnoa pacifica and Primnoa resedaeformis, with possible link between microbiome composition and host genotype", "identifier": [ { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse IndexID", "value": "70198773", "url": "https://pubs.usgs.gov/publication/70198773" }, { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse Internal ID", "value": 70198773 }, { "@type": "PropertyValue", "propertyID": "DOI", "value": "10.1038/s41598-018-30901-z", "url": "https://doi.org/10.1038/s41598-018-30901-z" } ], "journal": { "@type": "Periodical", "name": "Scientific Reports", "volumeNumber": "8", "issueNumber": null }, "inLanguage": "en", "isPartOf": [ { "@type": "CreativeWorkSeries", "name": "Scientific Reports" } ], "datePublished": "2018", "dateModified": "2018-08-24", "abstract": "Cold-water corals provide critical habitats for a multitude of marine species, but are understudied relative to tropical corals.\u00a0Primnoa pacifica\u00a0is a cold-water coral prevalent throughout Alaskan waters, while another species in the genus,\u00a0Primnoa resedaeformis, is widely distributed in the Atlantic Ocean. This study examined the V4-V5 region of the 16S rRNA gene after amplifying and pyrosequencing bacterial DNA from samples of these species. Key differences between the two species\u2019 microbiomes included a robust presence of bacteria belonging to the Chlamydiales order in most of the\u00a0P. pacifica\u00a0samples, whereas no more than 2% of any microbial community from\u00a0P. resedaeformiscomprised these bacteria. Microbiomes of\u00a0P. resedaeformis\u00a0exhibited higher diversity than those of\u00a0P. pacifica, and the two species largely clustered separately in a principal coordinate analysis. Comparison of\u00a0P. resedaeformis\u00a0microbiomes from samples collected in two submarine canyons revealed a significant difference between locations. This finding mirrored significant genetic differences among the\u00a0P. resedaeformis\u00a0from the two canyons based upon population genetic analysis of microsatellite loci. This study presents the first report of microbiomes associated with these two coral species.", "description": "12383; 15 p.", "publisher": { "@type": "Organization", "name": "Springer" }, "author": [ { "@type": "Person", "name": "Goldsmith, Dawn B. dgoldsmith@usgs.gov", "givenName": "Dawn B.", "familyName": "Goldsmith", "email": "dgoldsmith@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0003-0080-5346", "url": "https://orcid.org/0000-0003-0080-5346" }, "affiliation": [ { "@type": "Organization", "name": "St. Petersburg Coastal and Marine Science Center", "url": "https://www.usgs.gov/centers/spcmsc" } ] }, { "@type": "Person", "name": "Kellogg, Christina A. ckellogg@usgs.gov", "givenName": "Christina A.", "familyName": "Kellogg", "email": "ckellogg@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0002-6492-9455", "url": "https://orcid.org/0000-0002-6492-9455" }, "affiliation": [ { "@type": "Organization", "name": "St. Petersburg Coastal and Marine Science Center", "url": "https://www.usgs.gov/centers/spcmsc" }, { "@type": "Organization", "name": "Office of the AD Ecosystems", "url": "https://www.usgs.gov/mission-areas/ecosystems" } ] }, { "@type": "Person", "name": "Gray, Michael A.", "givenName": "Michael A.", "familyName": "Gray" }, { "@type": "Person", "name": "Stone, Robert P.", "givenName": "Robert P.", "familyName": "Stone" }, { "@type": "Person", "name": "Waller, Rhian G.", "givenName": "Rhian G.", "familyName": "Waller", "affiliation": [ { "@type": "Organization", "name": "University of Hawaii at Manoa, Honolulu, Hawaii" } ] }, { "@type": "Person", "name": "Brooke, Sandra D.", "givenName": "Sandra D.", "familyName": "Brooke" }, { "@type": "Person", "name": "Ross, Steve W.", "givenName": "Steve W.", "familyName": "Ross", "affiliation": [ { "@type": "Organization", "name": "University of North Carolina Wilmington" } ] }, { "@type": "Person", "name": "Morrison, Cheryl L. cmorrison@usgs.gov", "givenName": "Cheryl L.", "familyName": "Morrison", "email": "cmorrison@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0001-9425-691X", "url": "https://orcid.org/0000-0001-9425-691X" }, "affiliation": [ { "@type": "Organization", "name": "Leetown Science Center", "url": "https://www.usgs.gov/centers/eesc" } ] } ], "funder": [ { "@type": "Organization", "name": "St. Petersburg Coastal and Marine Science Center", "url": "https://www.usgs.gov/centers/spcmsc" } ] }, "OpenAlex": { "_id": "https://openalex.org/w2885942844", "abstract_inverted_index": { "Cold-water": [ 0 ], "corals": [ 1 ], "provide": [ 2 ], "critical": [ 3 ], "habitats": [ 4 ], "for": [ 5 ], "a": [ 6, 21, 73, 125, 142 ], "multitude": [ 7 ], "of": [ 8, 49, 62, 76, 85, 95, 106, 114, 130, 166, 175 ], "marine": [ 9 ], "species,": [ 10 ], "but": [ 11 ], "are": [ 12 ], "understudied": [ 13 ], "relative": [ 14 ], "to": [ 15, 79 ], "tropical": [ 16 ], 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