Item talk:Q239460
From geokb
{
"USGS Publications Warehouse": { "@context": "https://schema.org", "@type": "Article", "additionalType": "Journal Article", "name": "Coupling gene-based and classic veterinary diagnostics improves interpretation of health and immune function in the Agassiz\u2019s desert tortoise (Gopherus agassizii)", "identifier": [ { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse IndexID", "value": "70189424", "url": "https://pubs.usgs.gov/publication/70189424" }, { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse Internal ID", "value": 70189424 }, { "@type": "PropertyValue", "propertyID": "DOI", "value": "10.1093/conphys/cox037", "url": "https://doi.org/10.1093/conphys/cox037" } ], "journal": { "@type": "Periodical", "name": "Conservation Physiology", "volumeNumber": "5", "issueNumber": "1" }, "inLanguage": "en", "isPartOf": [ { "@type": "CreativeWorkSeries", "name": "Conservation Physiology" } ], "datePublished": "2017", "dateModified": "2017-07-13", "abstract": "The analysis of blood constituents is a widely used tool to aid in monitoring of animal health and disease. However, classic blood diagnostics (i.e. hematologic and plasma biochemical values) often do not provide sufficient information to determine the state of an animal\u2019s health. Field studies on wild tortoises and other reptiles have had limited success in drawing significant inferences between blood diagnostics and physiological and immunological condition. However, recent research using gene transcription profiling in the threatened Mojave desert tortoise (Gopherus agassizii) has proved useful in identifying immune or physiologic responses and overall health. To improve our understanding of health and immune function in tortoises, we evaluated both standard blood diagnostic (body condition, hematologic, plasma biochemistry values, trace elements, plasma proteins, vitamin A levels) and gene transcription profiles in 21 adult tortoises (11 clinically abnormal; 10 clinically normal) from Clark County, NV, USA. Necropsy and histology evaluations from clinically abnormal tortoises revealed multiple physiological complications, with moderate to severe rhinitis or pneumonia being the primary cause of morbidity in all but one of the examined animals. Clinically abnormal tortoises had increased transcription for four genes (SOD, MyD88, CL and Lep), increased lymphocyte production, biochemical enzymes and organics, trace elements of copper, and decreased numbers of leukocytes. We found significant positive correlations between increased transcription for SOD and increased trace elements for copper, as well as genes MyD88 and Lep with increased inflammation and microbial insults. Improved methods for health assessments are an important element of monitoring tortoise population recovery and can support the development of more robust diagnostic measures for ill animals, or individuals directly impacted by disturbance.", "description": "Article cox037; 17 p.", "publisher": { "@type": "Organization", "name": "Oxford Academic" }, "author": [ { "@type": "Person", "name": "Esque, Todd C. tesque@usgs.gov", "givenName": "Todd C.", "familyName": "Esque", "email": "tesque@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0002-4166-6234", "url": "https://orcid.org/0000-0002-4166-6234" }, "affiliation": [ { "@type": "Organization", "name": "Western Ecological Research Center", "url": "https://www.usgs.gov/centers/werc" } ] }, { "@type": "Person", "name": "Drake, K. Kristina kdrake@usgs.gov", "givenName": "K. Kristina", "familyName": "Drake", "email": "kdrake@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0003-0711-7634", "url": "https://orcid.org/0000-0003-0711-7634" }, "affiliation": [ { "@type": "Organization", "name": "Western Ecological Research Center", "url": "https://www.usgs.gov/centers/werc" } ] }, { "@type": "Person", "name": "Bowen, Lizabeth lbowen@usgs.gov", "givenName": "Lizabeth", "familyName": "Bowen", "email": "lbowen@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0001-9115-4336", "url": "https://orcid.org/0000-0001-9115-4336" }, "affiliation": [ { "@type": "Organization", "name": "Western Ecological Research Center", "url": "https://www.usgs.gov/centers/werc" } ] }, { "@type": "Person", "name": "Waters, Shannon C. swaters@usgs.gov", "givenName": "Shannon C.", "familyName": "Waters", "email": "swaters@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0002-9707-4684", "url": "https://orcid.org/0000-0002-9707-4684" }, "affiliation": [ { "@type": "Organization", "name": "Western Ecological Research Center", "url": "https://www.usgs.gov/centers/werc" } ] }, { "@type": "Person", "name": "Miles, A. Keith keith_miles@usgs.gov", "givenName": "A. Keith", "familyName": "Miles", "email": "keith_miles@usgs.gov", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0002-3108-808X", "url": "https://orcid.org/0000-0002-3108-808X" }, "affiliation": [ { "@type": "Organization", "name": "Western Ecological Research Center", "url": "https://www.usgs.gov/centers/werc" } ] }, { "@type": "Person", "name": "Lewison, Rebecca L.", "givenName": "Rebecca L.", "familyName": "Lewison", "affiliation": [ { "@type": "Organization", "name": "San Diego State University" } ] }, { "@type": "Person", "name": "Nussear, Kenneth E.", "givenName": "Kenneth E.", "familyName": "Nussear", "affiliation": [ { "@type": "Organization", "name": "Department of Geography, University of Nevada, Reno, Reno, NV" } ] }, { "@type": "Person", "name": "Braun, Josephine", "givenName": "Josephine", "familyName": "Braun", "affiliation": [ { "@type": "Organization", "name": "San Diego Zoo Global, San Diego, CA, USA" } ] } ], "funder": [ { "@type": "Organization", "name": "Western Ecological Research Center", "url": "https://www.usgs.gov/centers/werc" } ] }, "OpenAlex": { "abstract_inverted_index": { "The": [ 0 ], "analysis": [ 1 ], "of": [ 2, 14, 39, 98, 166, 172, 199, 204, 244, 254 ], "blood": [ 3, 21, 60, 109 ], "constituents": [ 4 ], "is": [ 5 ], "a": [ 6 ], "widely": [ 7 ], "used": [ 8 ], "tool": [ 9 ], "to": [ 10, 35, 157 ], "aid": [ 11 ], "in": [ 12, 55, 74, 85, 103, 128, 168 ], "monitoring": [ 13, 245 ], "animal": [ 15 ], "health": [ 16, 99, 238 ], "and": [ 17, 25, 48, 62, 64, 91, 100, 124, 144, 188, 195, 201, 216, 227, 232, 249 ], "disease.": [ 18 ], "However,": [ 19, 67 ], "classic": [ 20 ], "diagnostics": [ 22, 61 ], "(i.e.": [ 23 ], "hematologic": [ 24 ], "plasma": [ 26, 114, 119 ], "biochemical": [ 27, 193 ], "values)": [ 28 ], "often": [ 29 ], "do": [ 30 ], "not": [ 31 ], "provide": [ 32 ], "sufficient": [ 33 ], "information": [ 34 ], "determine": [ 36 ], "the": [ 37, 75, 163, 173, 252 ], "state": [ 38 ], "an": [ 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"we": [ 105 ], "evaluated": [ 106 ], "both": [ 107 ], "standard": [ 108 ], "diagnostic": [ 110, 257 ], "(body": [ 111 ], "condition,": [ 112 ], "hematologic,": [ 113 ], "biochemistry": [ 115 ], "values,": [ 116 ], "trace": [ 117, 197, 218 ], "elements,": [ 118 ], "proteins,": [ 120 ], "vitamin": [ 121 ], "A": [ 122 ], "levels)": [ 123 ], "profiles": [ 127 ], "21": [ 129 ], "adult": [ 130 ], "(11": [ 132 ], "clinically": [ 133, 136, 148 ], "abnormal;": [ 134 ], "10": [ 135 ], "normal)": [ 137 ], "from": [ 138, 147 ], "Clark": [ 139 ], "County,": [ 140 ], "NV,": [ 141 ], "USA.": [ 142 ], "Necropsy": [ 143 ], "histology": [ 145 ], "evaluations": [ 146 ], "abnormal": [ 149, 177 ], "revealed": [ 151 ], "multiple": [ 152 ], "complications,": [ 154 ], "with": [ 155, 229 ], "moderate": [ 156 ], "severe": [ 158 ], "rhinitis": [ 159 ], "pneumonia": [ 161 ], "being": [ 162 ], "primary": [ 164 ], "cause": [ 165 ], "morbidity": [ 167 ], "all": [ 169 ], "but": [ 170 ], "one": [ 171 ], "examined": [ 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