Item talk:Q253547
From geokb
{
"USGS Publications Warehouse": {
"@context": "https://schema.org",
"@type": "Article",
"additionalType": "Journal Article",
"name": "Does the virus cross the road? Viral phylogeographic patterns among bobcat populations reflect a history of urban development",
"identifier": [
{
"@type": "PropertyValue",
"propertyID": "USGS Publications Warehouse IndexID",
"value": "70210620",
"url": "https://pubs.usgs.gov/publication/70210620"
},
{
"@type": "PropertyValue",
"propertyID": "USGS Publications Warehouse Internal ID",
"value": 70210620
},
{
"@type": "PropertyValue",
"propertyID": "DOI",
"value": "10.1111/eva.12927",
"url": "https://doi.org/10.1111/eva.12927"
}
],
"journal": {
"@type": "Periodical",
"name": "Evolutionary Applications",
"volumeNumber": "13",
"issueNumber": "3"
},
"inLanguage": "en",
"isPartOf": [
{
"@type": "CreativeWorkSeries",
"name": "Evolutionary Applications"
}
],
"datePublished": "2020",
"dateModified": "2020-09-10",
"abstract": "Urban development has major impacts on connectivity among wildlife populations and is thus likely an important factor shaping pathogen transmission in wildlife. However, most investigations of wildlife diseases in urban areas focus on prevalence and infection risk rather than potential effects of urbanization on transmission itself. Feline immunodeficiency virus (FIV) is a directly transmitted retrovirus that infects many felid species and can be used as a model for studying pathogen transmission at landscape scales. We investigated phylogenetic relationships among FIV isolates sampled from five bobcat (Lynx rufus\u00a0) populations in coastal southern California that appear isolated due to major highways and dense urban development. Divergence dates among FIV phylogenetic lineages in several cases reflected historical urban growth and construction of major highways. We found strong FIV phylogeographic structure among three host populations north\u2010west of Los Angeles, largely coincident with host genetic structure. In contrast, relatively little FIV phylogeographic structure existed among two genetically distinct host populations south\u2010east of Los Angeles. Rates of FIV transfer among host populations did not vary significantly, with the lack of phylogenetic structure south\u2010east of Los Angeles unlikely to reflect frequent contemporary transmission among populations. Our results indicate that major barriers to host gene flow can also act as barriers to pathogen spread, suggesting potentially reduced susceptibility of fragmented populations to novel directly transmitted pathogens. Infrequent exchange of FIV among host populations suggests that populations would best be managed as distinct units in the event of a severe disease outbreak. Phylogeographic inference of pathogen transmission is useful for estimating the ability of geographic barriers to constrain disease spread and can provide insights into contemporary and historical drivers of host population connectivity.",
"description": "12 p.",
"publisher": {
"@type": "Organization",
"name": "Wiley"
},
"author": [
{
"@type": "Person",
"name": "Kozakiewicz, Christopher P.",
"givenName": "Christopher P.",
"familyName": "Kozakiewicz",
"affiliation": [
{
"@type": "Organization",
"name": "School of Biological Sciences, University of Tasmania, Hobart, Tasmania, Australia"
}
]
},
{
"@type": "Person",
"name": "Burridge, Christopher P.",
"givenName": "Christopher P.",
"familyName": "Burridge",
"affiliation": [
{
"@type": "Organization",
"name": "University of Tasmania"
}
]
},
{
"@type": "Person",
"name": "Funk, W. Chris",
"givenName": "W. Chris",
"familyName": "Funk",
"identifier": {
"@type": "PropertyValue",
"propertyID": "ORCID",
"value": "0000-0002-9254-6718",
"url": "https://orcid.org/0000-0002-9254-6718"
}
},
{
"@type": "Person",
"name": "Craft, Meggan E.",
"givenName": "Meggan E.",
"familyName": "Craft",
"affiliation": [
{
"@type": "Organization",
"name": "University of Minnesota"
}
]
},
{
"@type": "Person",
"name": "Crooks, Kevin R.",
"givenName": "Kevin R.",
"familyName": "Crooks",
"affiliation": [
{
"@type": "Organization",
"name": "Colorado State University"
}
]
},
{
"@type": "Person",
"name": "Fisher, Robert N. rfisher@usgs.gov",
"givenName": "Robert N.",
"familyName": "Fisher",
"email": "rfisher@usgs.gov",
"identifier": {
"@type": "PropertyValue",
"propertyID": "ORCID",
"value": "0000-0002-2956-3240",
"url": "https://orcid.org/0000-0002-2956-3240"
},
"affiliation": [
{
"@type": "Organization",
"name": "Western Ecological Research Center",
"url": "https://www.usgs.gov/centers/werc"
}
]
},
{
"@type": "Person",
"name": "Fountain-Jones, Nicholas M.",
"givenName": "Nicholas M.",
"familyName": "Fountain-Jones",
"identifier": {
"@type": "PropertyValue",
"propertyID": "ORCID",
"value": "0000-0001-9248-8493",
"url": "https://orcid.org/0000-0001-9248-8493"
}
},
{
"@type": "Person",
"name": "Jennings, Megan K.",
"givenName": "Megan K.",
"familyName": "Jennings",
"affiliation": [
{
"@type": "Organization",
"name": "San Diego State University"
}
]
},
{
"@type": "Person",
"name": "Kraberger, Simona J",
"givenName": "Simona J",
"familyName": "Kraberger",
"affiliation": [
{
"@type": "Organization",
"name": "Colorado State University"
}
]
},
{
"@type": "Person",
"name": "Lee, Justin S.",
"givenName": "Justin S.",
"familyName": "Lee",
"affiliation": [
{
"@type": "Organization",
"name": "Department of Microbiology, Immunology and Pathology, Colorado State University, Fort Collins, CO, USA"
}
]
},
{
"@type": "Person",
"name": "Lyren, Lisa M.",
"givenName": "Lisa M.",
"familyName": "Lyren"
},
{
"@type": "Person",
"name": "Riley, Seth P D",
"givenName": "Seth P D",
"familyName": "Riley",
"affiliation": [
{
"@type": "Organization",
"name": "NPS, Olympic National Park"
}
]
},
{
"@type": "Person",
"name": "Serieys, Laurel E K",
"givenName": "Laurel E K",
"familyName": "Serieys",
"affiliation": [
{
"@type": "Organization",
"name": "University of California Santa Cruz"
}
]
},
{
"@type": "Person",
"name": "VandeWoude, Sue",
"givenName": "Sue",
"familyName": "VandeWoude",
"affiliation": [
{
"@type": "Organization",
"name": "College of Veterinary Medicine and Biomedical Sciences, Colorado State University, Fort Collins, CO, USA"
}
]
},
{
"@type": "Person",
"name": "Carver, Scott",
"givenName": "Scott",
"familyName": "Carver",
"identifier": {
"@type": "PropertyValue",
"propertyID": "ORCID",
"value": "0000-0002-3579-7588",
"url": "https://orcid.org/0000-0002-3579-7588"
}
}
],
"funder": [
{
"@type": "Organization",
"name": "Western Ecological Research Center",
"url": "https://www.usgs.gov/centers/werc"
}
],
"spatialCoverage": [
{
"@type": "Place",
"additionalType": "country",
"name": "United States",
"url": "https://geonames.org/4074035"
},
{
"@type": "Place",
"additionalType": "state",
"name": "California"
},
{
"@type": "Place",
"additionalType": "city",
"name": "Los Angeles",
"url": "https://geonames.org/4046384"
},
{
"@type": "Place",
"additionalType": "city",
"name": "San Diego",
"url": "https://geonames.org/4726311"
},
{
"@type": "Place",
"geo": [
{
"@type": "GeoShape",
"additionalProperty": {
"@type": "PropertyValue",
"name": "GeoJSON",
"value": {
"type": "FeatureCollection",
"features": [
{
"type": "Feature",
"properties": {},
"geometry": {
"type": "Polygon",
"coordinates": [
[
[
-120.38818359375,
34.07086232376631
],
[
-117.65258789062499,
34.07086232376631
],
[
-117.65258789062499,
35.25907654252574
],
[
-120.38818359375,
35.25907654252574
],
[
-120.38818359375,
34.07086232376631
]
]
]
}
},
{
"type": "Feature",
"properties": {},
"geometry": {
"type": "Polygon",
"coordinates": [
[
[
-117.68554687499999,
32.55144352864431
],
[
-114.949951171875,
32.55144352864431
],
[
-114.949951171875,
34.25721644329402
],
[
-117.68554687499999,
34.25721644329402
],
[
-117.68554687499999,
32.55144352864431
]
]
]
}
}
]
}
}
},
{
"@type": "GeoCoordinates",
"latitude": 34.66496943314603,
"longitude": -119.02038574218749
},
{
"@type": "GeoCoordinates",
"latitude": 33.40432998596917,
"longitude": -116.3177490234375
}
]
}
]
},
"OpenAlex": {
"abstract_inverted_index": {
"Abstract": [
0
],
"Urban": [
1
],
"development": [
2
],
"has": [
3
],
"major": [
4,
100,
122,
195
],
"impacts": [
5
],
"on": [
6,
33,
44
],
"connectivity": [
7
],
"among": [
8,
79,
108,
130,
152,
166,
189,
225
],
"wildlife": [
9,
27
],
"populations": [
10,
90,
133,
157,
168,
215,
227,
230
],
"and": [
11,
35,
61,
102,
119,
264,
270
],
"is": [
12,
51,
251
],
"thus": [
13
],
"likely": [
14
],
"an": [
15
],
"important": [
16
],
"factor": [
17
],
"shaping": [
18
],
"pathogen": [
19,
70,
207,
249
],
"transmission": [
20,
45,
71,
188,
250
],
"in": [
21,
29,
91,
112,
238
],
"wildlife.": [
22
],
"However,": [
23
],
"most": [
24
],
"investigations": [
25
],
"of": [
26,
42,
121,
135,
159,
163,
176,
180,
213,
223,
241,
248,
257,
273
],
"diseases": [
28
],
"urban": [
30,
104,
117
],
"areas": [
31
],
"focus": [
32
],
"prevalence": [
34
],
"infection": [
36
],
"risk": [
37
],
"rather": [
38
],
"than": [
39
],
"potential": [
40
],
"effects": [
41
],
"urbanization": [
43
],
"itself.": [
46
],
"Feline": [
47
],
"immunodeficiency": [
48
],
"virus": [
49
],
"(FIV)": [
50
],
"a": [
52,
66,
242
],
"directly": [
53,
218
],
"transmitted": [
54,
219
],
"retrovirus": [
55
],
"that": [
56,
95,
194,
229
],
"infects": [
57
],
"many": [
58
],
"felid": [
59
],
"species": [
60
],
"can": [
62,
201,
265
],
"be": [
63,
233
],
"used": [
64
],
"as": [
65,
204,
235
],
"model": [
67
],
"for": [
68,
253
],
"studying": [
69
],
"at": [
72
],
"landscape": [
73
],
"scales.": [
74
],
"We": [
75,
124
],
"investigated": [
76
],
"phylogenetic": [
77,
110,
177
],
"relationships": [
78
],
"FIV": [
80,
109,
127,
148,
164,
224
],
"isolates": [
81
],
"sampled": [
82
],
"from": [
83
],
"five": [
84
],
"bobcat": [
85
],
"(": [
86
],
"Lynx": [
87
],
"rufus": [
88
],
")": [
89
],
"coastal": [
92
],
"southern": [
93
],
"California": [
94
],
"appear": [
96
],
"isolated": [
97
],
"due": [
98
],
"to": [
99,
184,
197,
206,
216,
260
],
"highways": [
101
],
"dense": [
103
],
"development.": [
105
],
"Divergence": [
106
],
"dates": [
107
],
"lineages": [
111
],
"several": [
113
],
"cases": [
114
],
"reflected": [
115
],
"historical": [
116,
271
],
"growth": [
118
],
"construction": [
120
],
"highways.": [
123
],
"found": [
125
],
"strong": [
126
],
"phylogeographic": [
128,
149
],
"structure": [
129,
150,
178
],
"three": [
131
],
"host": [
132,
141,
156,
167,
198,
226,
274
],
"north\u2010west": [
134
],
"Los": [
136,
160,
181
],
"Angeles,": [
137
],
"largely": [
138
],
"coincident": [
139
],
"with": [
140,
173
],
"genetic": [
142
],
"structure.": [
143
],
"In": [
144
],
"contrast,": [
145
],
"relatively": [
146
],
"little": [
147
],
"existed": [
151
],
"two": [
153
],
"genetically": [
154
],
"distinct": [
155,
236
],
"south\u2010east": [
158,
179
],
"Angeles.": [
161
],
"Rates": [
162
],
"transfer": [
165
],
"did": [
169
],
"not": [
170
],
"vary": [
171
],
"significantly,": [
172
],
"the": [
174,
239,
255
],
"lack": [
175
],
"Angeles": [
182
],
"unlikely": [
183
],
"reflect": [
185
],
"frequent": [
186
],
"contemporary": [
187,
269
],
"populations.": [
190
],
"Our": [
191
],
"results": [
192
],
"indicate": [
193
],
"barriers": [
196,
205,
259
],
"gene": [
199
],
"flow": [
200
],
"also": [
202
],
"act": [
203
],
"spread,": [
208
],
"suggesting": [
209
],
"potentially": [
210
],
"reduced": [
211
],
"susceptibility": [
212
],
"fragmented": [
214
],
"novel": [
217
],
"pathogens.": [
220
],
"Infrequent": [
221
],
"exchange": [
222
],
"suggests": [
228
],
"would": [
231
],
"best": [
232
],
"managed": [
234
],
"units": [
237
],
"event": [
240
],
"severe": [
243
],
"disease": [
244,
262
],
"outbreak.": [
245
],
"Phylogeographic": [
246
],
"inference": [
247
],
"useful": [
252
],
"estimating": [
254
],
"ability": [
256
],
"geographic": [
258
],
"constrain": [
261
],
"spread": [
263
],
"provide": [
266
],
"insights": [
267
],
"into": [
268
],
"drivers": [
272
],
"population": [
275
],
"connectivity.": [
276
]
},
"apc_list": {
"value": 2450,
"currency": "EUR",
"value_usd": 3200,
"provenance": "doaj"
},
"apc_paid": {
"value": 2450,
"currency": "EUR",
"value_usd": 3200,
"provenance": "doaj"
},
"authorships": [
{
"author_position": "first",
"author": {
"id": "https://openalex.org/A5042761777",
"display_name": "Christopher P. Kozakiewicz",
"orcid": "https://orcid.org/0000-0002-4868-9252"
},
"institutions": [
{
"id": "https://openalex.org/I129801699",
"display_name": "University of Tasmania",
"ror": "https://ror.org/01nfmeh72",
"country_code": "AU",
"type": "education",
"lineage": [
"https://openalex.org/I129801699"
]
}
],
"countries": [
"AU"
],
"is_corresponding": true,
"raw_author_name": "Christopher P. Kozakiewicz",
"raw_affiliation_strings": [
"School of Natural Sciences, University of Tasmania, Hobart, TAS, Australia"
],
"affiliations": [
{
"raw_affiliation_string": "School of Natural Sciences, University of Tasmania, Hobart, TAS, Australia",
"institution_ids": [
"https://openalex.org/I129801699"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5063013356",
"display_name": "Christopher P. Burridge",
"orcid": "https://orcid.org/0000-0002-8185-6091"
},
"institutions": [
{
"id": "https://openalex.org/I129801699",
"display_name": "University of Tasmania",
"ror": "https://ror.org/01nfmeh72",
"country_code": "AU",
"type": "education",
"lineage": [
"https://openalex.org/I129801699"
]
}
],
"countries": [
"AU"
],
"is_corresponding": false,
"raw_author_name": "Christopher P. Burridge",
"raw_affiliation_strings": [
"School of Natural Sciences, University of Tasmania, Hobart, TAS, Australia"
],
"affiliations": [
{
"raw_affiliation_string": "School of Natural Sciences, University of Tasmania, Hobart, TAS, Australia",
"institution_ids": [
"https://openalex.org/I129801699"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5064390526",
"display_name": "W. Chris Funk",
"orcid": "https://orcid.org/0000-0002-6466-3618"
},
"institutions": [
{
"id": "https://openalex.org/I92446798",
"display_name": "Colorado State University",
"ror": "https://ror.org/03k1gpj17",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I4210131357",
"https://openalex.org/I92446798"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "W. Chris Funk",
"raw_affiliation_strings": [
"Department of Biology, Colorado State University, Fort Collins, CO, USA",
"Graduate Degree Program in Ecology, Colorado State University, Fort Collins, CO, USA"
],
"affiliations": [
{
"raw_affiliation_string": "Graduate Degree Program in Ecology, Colorado State University, Fort Collins, CO, USA",
"institution_ids": []
},
{
"raw_affiliation_string": "Department of Biology, Colorado State University, Fort Collins, CO, USA",
"institution_ids": [
"https://openalex.org/I92446798"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5018026845",
"display_name": "Meggan E. Craft",
"orcid": "https://orcid.org/0000-0001-5333-8513"
},
"institutions": [
{
"id": "https://openalex.org/I130238516",
"display_name": "University of Minnesota",
"ror": "https://ror.org/017zqws13",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I130238516"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Meggan E. Craft",
"raw_affiliation_strings": [
"Department of Veterinary Population Medicine, University of Minnesota, St Paul, MN, USA"
],
"affiliations": [
{
"raw_affiliation_string": "Department of Veterinary Population Medicine, University of Minnesota, St Paul, MN, USA",
"institution_ids": [
"https://openalex.org/I130238516"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5014280017",
"display_name": "Kevin R. Crooks",
"orcid": "https://orcid.org/0000-0002-3742-4734"
},
"institutions": [
{
"id": "https://openalex.org/I92446798",
"display_name": "Colorado State University",
"ror": "https://ror.org/03k1gpj17",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I4210131357",
"https://openalex.org/I92446798"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Kevin R. Crooks",
"raw_affiliation_strings": [
"Department of Fish, Wildlife, and Conservation Biology, Colorado State University, Fort Collins, CO, USA"
],
"affiliations": [
{
"raw_affiliation_string": "Department of Fish, Wildlife, and Conservation Biology, Colorado State University, Fort Collins, CO, USA",
"institution_ids": [
"https://openalex.org/I92446798"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5033520976",
"display_name": "Robert N. Fisher",
"orcid": "https://orcid.org/0000-0002-2956-3240"
},
"institutions": [
{
"id": "https://openalex.org/I1286329397",
"display_name": "United States Geological Survey",
"ror": "https://ror.org/035a68863",
"country_code": "US",
"type": "government",
"lineage": [
"https://openalex.org/I1286329397",
"https://openalex.org/I1335927249"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Robert N. Fisher",
"raw_affiliation_strings": [
"Western Ecological Research Center, U.S. Geological Survey, San Diego, CA, USA"
],
"affiliations": [
{
"raw_affiliation_string": "Western Ecological Research Center, U.S. Geological Survey, San Diego, CA, USA",
"institution_ids": [
"https://openalex.org/I1286329397"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5007162915",
"display_name": "Nicholas M. Fountain\u2010Jones",
"orcid": "https://orcid.org/0000-0001-9248-8493"
},
"institutions": [
{
"id": "https://openalex.org/I130238516",
"display_name": "University of Minnesota",
"ror": "https://ror.org/017zqws13",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I130238516"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Nicholas M. Fountain\u2010Jones",
"raw_affiliation_strings": [
"Department of Veterinary Population Medicine, University of Minnesota, St Paul, MN, USA"
],
"affiliations": [
{
"raw_affiliation_string": "Department of Veterinary Population Medicine, University of Minnesota, St Paul, MN, USA",
"institution_ids": [
"https://openalex.org/I130238516"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5017393374",
"display_name": "Megan K. Jennings",
"orcid": "https://orcid.org/0000-0002-3707-851X"
},
"institutions": [
{
"id": "https://openalex.org/I26538001",
"display_name": "San Diego State University",
"ror": "https://ror.org/0264fdx42",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I26538001"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Megan K. Jennings",
"raw_affiliation_strings": [
"Biology Department, San Diego State University, San Diego, CA, USA"
],
"affiliations": [
{
"raw_affiliation_string": "Biology Department, San Diego State University, San Diego, CA, USA",
"institution_ids": [
"https://openalex.org/I26538001"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5071021144",
"display_name": "Simona Kraberger",
"orcid": "https://orcid.org/0000-0002-7037-9242"
},
"institutions": [
{
"id": "https://openalex.org/I92446798",
"display_name": "Colorado State University",
"ror": "https://ror.org/03k1gpj17",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I4210131357",
"https://openalex.org/I92446798"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Simona J. Kraberger",
"raw_affiliation_strings": [
"Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA"
],
"affiliations": [
{
"raw_affiliation_string": "Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA",
"institution_ids": [
"https://openalex.org/I92446798"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5040659299",
"display_name": "Justin S. Lee",
"orcid": null
},
"institutions": [
{
"id": "https://openalex.org/I92446798",
"display_name": "Colorado State University",
"ror": "https://ror.org/03k1gpj17",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I4210131357",
"https://openalex.org/I92446798"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Justin S. Lee",
"raw_affiliation_strings": [
"Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA"
],
"affiliations": [
{
"raw_affiliation_string": "Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA",
"institution_ids": [
"https://openalex.org/I92446798"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5042232880",
"display_name": "Lisa M. Lyren",
"orcid": null
},
"institutions": [
{
"id": "https://openalex.org/I1286329397",
"display_name": "United States Geological Survey",
"ror": "https://ror.org/035a68863",
"country_code": "US",
"type": "government",
"lineage": [
"https://openalex.org/I1286329397",
"https://openalex.org/I1335927249"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Lisa M. Lyren",
"raw_affiliation_strings": [
"Western Ecological Research Center, U.S. Geological Survey, Thousand Oaks, CA, USA"
],
"affiliations": [
{
"raw_affiliation_string": "Western Ecological Research Center, U.S. Geological Survey, Thousand Oaks, CA, USA",
"institution_ids": [
"https://openalex.org/I1286329397"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5104007941",
"display_name": "Seth P. D. Riley",
"orcid": null
},
"institutions": [
{
"id": "https://openalex.org/I1304808963",
"display_name": "National Park Service",
"ror": "https://ror.org/044zqqy65",
"country_code": "US",
"type": "government",
"lineage": [
"https://openalex.org/I1304808963",
"https://openalex.org/I1335927249"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Seth P. D. Riley",
"raw_affiliation_strings": [
"National Park Service, Santa Monica Mountains National Recreation Area, Thousand Oaks, CA, USA"
],
"affiliations": [
{
"raw_affiliation_string": "National Park Service, Santa Monica Mountains National Recreation Area, Thousand Oaks, CA, USA",
"institution_ids": [
"https://openalex.org/I1304808963"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5003540094",
"display_name": "Laurel E. K. Serieys",
"orcid": "https://orcid.org/0000-0002-0399-6646"
},
"institutions": [
{
"id": "https://openalex.org/I185103710",
"display_name": "University of California, Santa Cruz",
"ror": "https://ror.org/03s65by71",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I185103710"
]
},
{
"id": "https://openalex.org/I157614274",
"display_name": "University of Cape Town",
"ror": "https://ror.org/03p74gp79",
"country_code": "ZA",
"type": "education",
"lineage": [
"https://openalex.org/I157614274"
]
}
],
"countries": [
"US",
"ZA"
],
"is_corresponding": false,
"raw_author_name": "Laurel E. K. Serieys",
"raw_affiliation_strings": [
"Department of Environmental Studies, University of California Santa Cruz, Santa Cruz, CA, USA",
"Institute for Communities and Wildlife in Africa, Biological Sciences, University of Cape Town, Cape Town, South Africa"
],
"affiliations": [
{
"raw_affiliation_string": "Department of Environmental Studies, University of California Santa Cruz, Santa Cruz, CA, USA",
"institution_ids": [
"https://openalex.org/I185103710"
]
},
{
"raw_affiliation_string": "Institute for Communities and Wildlife in Africa, Biological Sciences, University of Cape Town, Cape Town, South Africa",
"institution_ids": [
"https://openalex.org/I157614274"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5053993900",
"display_name": "Sue VandeWoude",
"orcid": "https://orcid.org/0000-0001-9227-1622"
},
"institutions": [
{
"id": "https://openalex.org/I92446798",
"display_name": "Colorado State University",
"ror": "https://ror.org/03k1gpj17",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I4210131357",
"https://openalex.org/I92446798"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Sue VandeWoude",
"raw_affiliation_strings": [
"Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA"
],
"affiliations": [
{
"raw_affiliation_string": "Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA",
"institution_ids": [
"https://openalex.org/I92446798"
]
}
]
},
{
"author_position": "last",
"author": {
"id": "https://openalex.org/A5046044013",
"display_name": "Scott Carver",
"orcid": "https://orcid.org/0000-0002-3579-7588"
},
"institutions": [
{
"id": "https://openalex.org/I129801699",
"display_name": "University of Tasmania",
"ror": "https://ror.org/01nfmeh72",
"country_code": "AU",
"type": "education",
"lineage": [
"https://openalex.org/I129801699"
]
}
],
"countries": [
"AU"
],
"is_corresponding": false,
"raw_author_name": "Scott Carver",
"raw_affiliation_strings": [
"School of Natural Sciences, University of Tasmania, Hobart, TAS, Australia"
],
"affiliations": [
{
"raw_affiliation_string": "School of Natural Sciences, University of Tasmania, Hobart, TAS, Australia",
"institution_ids": [
"https://openalex.org/I129801699"
]
}
]
}
],
"best_oa_location": {
"is_oa": true,
"landing_page_url": "https://doi.org/10.1111/eva.12927",
"pdf_url": "https://onlinelibrary.wiley.com/doi/pdfdirect/10.1111/eva.12927",
"source": {
"id": "https://openalex.org/S140378306",
"display_name": "Evolutionary Applications",
"issn_l": "1752-4571",
"issn": [
"1752-4563",
"1752-4571"
],
"is_oa": true,
"is_in_doaj": true,
"is_core": true,
"host_organization": "https://openalex.org/P4310320595",
"host_organization_name": "Wiley",
"host_organization_lineage": [
"https://openalex.org/P4310320595"
],
"host_organization_lineage_names": [
"Wiley"
],
"type": "journal"
},
"license": "cc-by",
"license_id": "https://openalex.org/licenses/cc-by",
"version": "publishedVersion",
"is_accepted": true,
"is_published": true
},
"biblio": {
"volume": "13",
"issue": "8",
"first_page": "1806",
"last_page": "1817"
},
"citation_normalized_percentile": {
"value": 0.618807,
"is_in_top_1_percent": false,
"is_in_top_10_percent": false
},
"cited_by_api_url": "https://api.openalex.org/works?filter=cites:W3003549976",
"cited_by_count": 9,
"cited_by_percentile_year": {
"min": 87,
"max": 88
},
"concepts": [
{
"id": "https://openalex.org/C86803240",
"wikidata": "https://www.wikidata.org/wiki/Q420",
"display_name": "Biology",
"level": 0,
"score": 0.809065
},
{
"id": "https://openalex.org/C94043034",
"wikidata": "https://www.wikidata.org/wiki/Q377756",
"display_name": "Phylogeography",
"level": 4,
"score": 0.7322995
},
{
"id": "https://openalex.org/C29376679",
"wikidata": "https://www.wikidata.org/wiki/Q241741",
"display_name": "Wildlife",
"level": 2,
"score": 0.6915368
},
{
"id": "https://openalex.org/C116675565",
"wikidata": "https://www.wikidata.org/wiki/Q3241045",
"display_name": "Outbreak",
"level": 2,
"score": 0.5560615
},
{
"id": "https://openalex.org/C761482",
"wikidata": "https://www.wikidata.org/wiki/Q118093",
"display_name": "Transmission (telecommunications)",
"level": 2,
"score": 0.54442555
},
{
"id": "https://openalex.org/C193252679",
"wikidata": "https://www.wikidata.org/wiki/Q242125",
"display_name": "Phylogenetic tree",
"level": 3,
"score": 0.52827036
},
{
"id": "https://openalex.org/C126831891",
"wikidata": "https://www.wikidata.org/wiki/Q221673",
"display_name": "Host (biology)",
"level": 2,
"score": 0.51544505
},
{
"id": "https://openalex.org/C18903297",
"wikidata": "https://www.wikidata.org/wiki/Q7150",
"display_name": "Ecology",
"level": 1,
"score": 0.50384516
},
{
"id": "https://openalex.org/C78458016",
"wikidata": "https://www.wikidata.org/wiki/Q840400",
"display_name": "Evolutionary biology",
"level": 1,
"score": 0.36826235
},
{
"id": "https://openalex.org/C90856448",
"wikidata": "https://www.wikidata.org/wiki/Q431",
"display_name": "Zoology",
"level": 1,
"score": 0.3505119
},
{
"id": "https://openalex.org/C159047783",
"wikidata": "https://www.wikidata.org/wiki/Q7215",
"display_name": "Virology",
"level": 1,
"score": 0.25834352
},
{
"id": "https://openalex.org/C54355233",
"wikidata": "https://www.wikidata.org/wiki/Q7162",
"display_name": "Genetics",
"level": 1,
"score": 0.23823175
},
{
"id": "https://openalex.org/C104317684",
"wikidata": "https://www.wikidata.org/wiki/Q7187",
"display_name": "Gene",
"level": 2,
"score": 0.16559905
},
{
"id": "https://openalex.org/C119599485",
"wikidata": "https://www.wikidata.org/wiki/Q43035",
"display_name": "Electrical engineering",
"level": 1,
"score": 0.0
},
{
"id": "https://openalex.org/C127413603",
"wikidata": "https://www.wikidata.org/wiki/Q11023",
"display_name": "Engineering",
"level": 0,
"score": 0.0
}
],
"corresponding_author_ids": [
"https://openalex.org/A5042761777"
],
"corresponding_institution_ids": [
"https://openalex.org/I129801699"
],
"countries_distinct_count": 3,
"counts_by_year": [
{
"year": 2022,
"cited_by_count": 2
},
{
"year": 2021,
"cited_by_count": 3
},
{
"year": 2020,
"cited_by_count": 4
}
],
"created_date": "2020-02-07",
"datasets": [],
"display_name": "Does the virus cross the road? Viral phylogeographic patterns among bobcat populations reflect a history of urban development",
"doi": "https://doi.org/10.1111/eva.12927",
"fwci": 1.05,
"grants": [
{
"funder": "https://openalex.org/F4320308025",
"funder_display_name": "California Department of Transportation",
"award_id": null
},
{
"funder": "https://openalex.org/F4320332183",
"funder_display_name": "U.S. Geological Survey",
"award_id": null
},
{
"funder": "https://openalex.org/F4320337400",
"funder_display_name": "Division of Environmental Biology",
"award_id": "1413925"
},
{
"funder": "https://openalex.org/F4320337401",
"funder_display_name": "Division of Emerging Frontiers",
"award_id": "0723676"
}
],
"has_fulltext": false,
"id": "https://openalex.org/W3003549976",
"ids": {
"openalex": "https://openalex.org/W3003549976",
"doi": "https://doi.org/10.1111/eva.12927",
"mag": "3003549976",
"pmid": "https://pubmed.ncbi.nlm.nih.gov/32908587",
"pmcid": "https://www.ncbi.nlm.nih.gov/pmc/articles/7463333"
},
"indexed_in": [
"crossref",
"doaj",
"pubmed"
],
"institutions_distinct_count": 8,
"is_paratext": false,
"is_retracted": false,
"keywords": [
{
"id": "https://openalex.org/keywords/genetic-characterization",
"display_name": "Genetic Characterization",
"score": 0.439642
}
],
"language": "en",
"locations": [
{
"is_oa": true,
"landing_page_url": "https://doi.org/10.1111/eva.12927",
"pdf_url": "https://onlinelibrary.wiley.com/doi/pdfdirect/10.1111/eva.12927",
"source": {
"id": "https://openalex.org/S140378306",
"display_name": "Evolutionary Applications",
"issn_l": "1752-4571",
"issn": [
"1752-4563",
"1752-4571"
],
"is_oa": true,
"is_in_doaj": true,
"is_core": true,
"host_organization": "https://openalex.org/P4310320595",
"host_organization_name": "Wiley",
"host_organization_lineage": [
"https://openalex.org/P4310320595"
],
"host_organization_lineage_names": [
"Wiley"
],
"type": "journal"
},
"license": "cc-by",
"license_id": "https://openalex.org/licenses/cc-by",
"version": "publishedVersion",
"is_accepted": true,
"is_published": true
},
{
"is_oa": false,
"landing_page_url": "https://doaj.org/article/cbef4de70faa4160875f0414c900e665",
"pdf_url": null,
"source": {
"id": "https://openalex.org/S4306401280",
"display_name": "DOAJ (DOAJ: Directory of Open Access Journals)",
"issn_l": null,
"issn": null,
"is_oa": true,
"is_in_doaj": false,
"is_core": false,
"host_organization": null,
"host_organization_name": null,
"host_organization_lineage": [],
"host_organization_lineage_names": [],
"type": "repository"
},
"license": null,
"license_id": null,
"version": null,
"is_accepted": false,
"is_published": false
},
{
"is_oa": true,
"landing_page_url": "https://figshare.com/articles/journal_contribution/Does_the_virus_cross_the_road_Viral_phylogeographic_patterns_among_bobcat_populations_reflect_a_history_of_urban_development/22991795",
"pdf_url": "https://figshare.com/articles/journal_contribution/Does_the_virus_cross_the_road_Viral_phylogeographic_patterns_among_bobcat_populations_reflect_a_history_of_urban_development/22991795/1/files/40740608.pdf",
"source": {
"id": "https://openalex.org/S4306402621",
"display_name": "INDIGO (University of Illinois at Chicago)",
"issn_l": null,
"issn": null,
"is_oa": true,
"is_in_doaj": false,
"is_core": false,
"host_organization": "https://openalex.org/I39422238",
"host_organization_name": "University of Illinois at Chicago",
"host_organization_lineage": [
"https://openalex.org/I39422238"
],
"host_organization_lineage_names": [
"University of Illinois at Chicago"
],
"type": "repository"
},
"license": "cc-by",
"license_id": "https://openalex.org/licenses/cc-by",
"version": "publishedVersion",
"is_accepted": true,
"is_published": true
},
{
"is_oa": true,
"landing_page_url": "https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7463333",
"pdf_url": null,
"source": {
"id": "https://openalex.org/S2764455111",
"display_name": "PubMed Central",
"issn_l": null,
"issn": null,
"is_oa": true,
"is_in_doaj": false,
"is_core": false,
"host_organization": "https://openalex.org/I1299303238",
"host_organization_name": "National Institutes of Health",
"host_organization_lineage": [
"https://openalex.org/I1299303238"
],
"host_organization_lineage_names": [
"National Institutes of Health"
],
"type": "repository"
},
"license": null,
"license_id": null,
"version": "publishedVersion",
"is_accepted": true,
"is_published": true
},
{
"is_oa": true,
"landing_page_url": "https://eprints.utas.edu.au/35153/1/140753%20-%20Does%20the%20virus%20cross%20the%20road.pdf",
"pdf_url": "https://eprints.utas.edu.au/35153/1/140753%20-%20Does%20the%20virus%20cross%20the%20road.pdf",
"source": {
"id": "https://openalex.org/S4377196333",
"display_name": "Open Access Repository (University of Tasmania)",
"issn_l": null,
"issn": null,
"is_oa": false,
"is_in_doaj": false,
"is_core": false,
"host_organization": "https://openalex.org/I129801699",
"host_organization_name": "University of Tasmania",
"host_organization_lineage": [
"https://openalex.org/I129801699"
],
"host_organization_lineage_names": [
"University of Tasmania"
],
"type": "repository"
},
"license": "cc-by",
"license_id": "https://openalex.org/licenses/cc-by",
"version": "acceptedVersion",
"is_accepted": true,
"is_published": false
},
{
"is_oa": false,
"landing_page_url": "https://pubmed.ncbi.nlm.nih.gov/32908587",
"pdf_url": null,
"source": {
"id": "https://openalex.org/S4306525036",
"display_name": "PubMed",
"issn_l": null,
"issn": null,
"is_oa": false,
"is_in_doaj": false,
"is_core": false,
"host_organization": "https://openalex.org/I1299303238",
"host_organization_name": "National Institutes of Health",
"host_organization_lineage": [
"https://openalex.org/I1299303238"
],
"host_organization_lineage_names": [
"National Institutes of Health"
],
"type": "repository"
},
"license": null,
"license_id": null,
"version": null,
"is_accepted": false,
"is_published": false
}
],
"locations_count": 6,
"mesh": [],
"ngrams_url": "https://api.openalex.org/works/W3003549976/ngrams",
"open_access": {
"is_oa": true,
"oa_status": "gold",
"oa_url": "https://onlinelibrary.wiley.com/doi/pdfdirect/10.1111/eva.12927",
"any_repository_has_fulltext": true
},
"primary_location": {
"is_oa": true,
"landing_page_url": "https://doi.org/10.1111/eva.12927",
"pdf_url": "https://onlinelibrary.wiley.com/doi/pdfdirect/10.1111/eva.12927",
"source": {
"id": "https://openalex.org/S140378306",
"display_name": "Evolutionary Applications",
"issn_l": "1752-4571",
"issn": [
"1752-4563",
"1752-4571"
],
"is_oa": true,
"is_in_doaj": true,
"is_core": true,
"host_organization": "https://openalex.org/P4310320595",
"host_organization_name": "Wiley",
"host_organization_lineage": [
"https://openalex.org/P4310320595"
],
"host_organization_lineage_names": [
"Wiley"
],
"type": "journal"
},
"license": "cc-by",
"license_id": "https://openalex.org/licenses/cc-by",
"version": "publishedVersion",
"is_accepted": true,
"is_published": true
},
"primary_topic": {
"id": "https://openalex.org/T10112",
"display_name": "Human Immunodeficiency Virus/Acquired Immunodeficiency Syndrome",
"score": 0.9995,
"subfield": {
"id": "https://openalex.org/subfields/2406",
"display_name": "Virology"
},
"field": {
"id": "https://openalex.org/fields/24",
"display_name": "Immunology and Microbiology"
},
"domain": {
"id": "https://openalex.org/domains/1",
"display_name": "Life Sciences"
}
},
"publication_date": "2020-02-20",
"publication_year": 2020,
"referenced_works": [
"https://openalex.org/W1504542975",
"https://openalex.org/W1896333445",
"https://openalex.org/W1915699870",
"https://openalex.org/W1935420161",
"https://openalex.org/W1972495095",
"https://openalex.org/W1973194618",
"https://openalex.org/W1973667633",
"https://openalex.org/W1980555349",
"https://openalex.org/W1981152907",
"https://openalex.org/W1990096140",
"https://openalex.org/W2000870362",
"https://openalex.org/W2008827851",
"https://openalex.org/W2012713016",
"https://openalex.org/W2027427851",
"https://openalex.org/W2028889649",
"https://openalex.org/W2044044562",
"https://openalex.org/W2053839093",
"https://openalex.org/W2062865916",
"https://openalex.org/W2075952068",
"https://openalex.org/W2076617993",
"https://openalex.org/W2080655727",
"https://openalex.org/W2085467573",
"https://openalex.org/W2091181646",
"https://openalex.org/W2093424405",
"https://openalex.org/W2095886196",
"https://openalex.org/W2098998255",
"https://openalex.org/W2105984161",
"https://openalex.org/W2112242441",
"https://openalex.org/W2115906456",
"https://openalex.org/W2117368100",
"https://openalex.org/W2128720756",
"https://openalex.org/W2129654929",
"https://openalex.org/W2130234546",
"https://openalex.org/W2130362098",
"https://openalex.org/W2135843053",
"https://openalex.org/W2138178197",
"https://openalex.org/W2143119188",
"https://openalex.org/W2143430108",
"https://openalex.org/W2144141060",
"https://openalex.org/W2145357187",
"https://openalex.org/W2151556775",
"https://openalex.org/W2156358357",
"https://openalex.org/W2158690491",
"https://openalex.org/W2161033472",
"https://openalex.org/W2161125527",
"https://openalex.org/W2167528060",
"https://openalex.org/W2167724118",
"https://openalex.org/W2167806262",
"https://openalex.org/W2168135427",
"https://openalex.org/W2171126517",
"https://openalex.org/W2274950481",
"https://openalex.org/W2287419023",
"https://openalex.org/W2291358298",
"https://openalex.org/W2341341327",
"https://openalex.org/W2523789355",
"https://openalex.org/W2563914597",
"https://openalex.org/W2582743722",
"https://openalex.org/W2753385451",
"https://openalex.org/W2755331695",
"https://openalex.org/W2760869802",
"https://openalex.org/W2790536788",
"https://openalex.org/W2801159594",
"https://openalex.org/W2809760746",
"https://openalex.org/W2856267312",
"https://openalex.org/W2981139703",
"https://openalex.org/W3003549976",
"https://openalex.org/W4210472764",
"https://openalex.org/W4211177544"
],
"referenced_works_count": 68,
"related_works": [
"https://openalex.org/W4385969441",
"https://openalex.org/W3096227606",
"https://openalex.org/W3028429280",
"https://openalex.org/W2557977292",
"https://openalex.org/W2431766951",
"https://openalex.org/W2412355096",
"https://openalex.org/W2373635223",
"https://openalex.org/W2362266265",
"https://openalex.org/W1990012352",
"https://openalex.org/W127458931"
],
"sustainable_development_goals": [
{
"id": "https://metadata.un.org/sdg/11",
"display_name": "Sustainable cities and communities",
"score": 0.83
}
],
"title": "Does the virus cross the road? Viral phylogeographic patterns among bobcat populations reflect a history of urban development",
"topics": [
{
"id": "https://openalex.org/T10112",
"display_name": "Human Immunodeficiency Virus/Acquired Immunodeficiency Syndrome",
"score": 0.9995,
"subfield": {
"id": "https://openalex.org/subfields/2406",
"display_name": "Virology"
},
"field": {
"id": "https://openalex.org/fields/24",
"display_name": "Immunology and Microbiology"
},
"domain": {
"id": "https://openalex.org/domains/1",
"display_name": "Life Sciences"
}
},
{
"id": "https://openalex.org/T10625",
"display_name": "Herpesviruses: Epidemiology, Pathogenesis, and Management",
"score": 0.9977,
"subfield": {
"id": "https://openalex.org/subfields/2713",
"display_name": "Epidemiology"
},
"field": {
"id": "https://openalex.org/fields/27",
"display_name": "Medicine"
},
"domain": {
"id": "https://openalex.org/domains/4",
"display_name": "Health Sciences"
}
},
{
"id": "https://openalex.org/T11560",
"display_name": "Dynamics of Livestock Disease Transmission and Control",
"score": 0.9976,
"subfield": {
"id": "https://openalex.org/subfields/1102",
"display_name": "Agronomy and Crop Science"
},
"field": {
"id": "https://openalex.org/fields/11",
"display_name": "Agricultural and Biological Sciences"
},
"domain": {
"id": "https://openalex.org/domains/1",
"display_name": "Life Sciences"
}
}
],
"type": "article",
"type_crossref": "journal-article",
"updated_date": "2024-08-12T02:21:34.309119",
"versions": []
}
}
