{
"USGS Publications Warehouse": { "@context": "https://schema.org", "@type": "Article", "additionalType": "Journal Article", "name": "Glacial vicariance and secondary contact shape demographic histories in a freshwater mussel species complex", "identifier": [ { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse IndexID", "value": "70250875", "url": "https://pubs.usgs.gov/publication/70250875" }, { "@type": "PropertyValue", "propertyID": "USGS Publications Warehouse Internal ID", "value": 70250875 }, { "@type": "PropertyValue", "propertyID": "DOI", "value": "10.1093/jhered/esad075", "url": "https://doi.org/10.1093/jhered/esad075" } ], "journal": { "@type": "Periodical", "name": "Journal of Heredity", "volumeNumber": "115", "issueNumber": "1" }, "inLanguage": "en", "isPartOf": [ { "@type": "CreativeWorkSeries", "name": "Journal of Heredity" } ], "datePublished": "2024", "dateModified": "2024-02-07", "abstract": "Characterizing the mechanisms influencing the distribution of genetic variation in aquatic species can be difficult due to the dynamic nature of hydrological landscapes. In North America\u2019s Central Highlands, a complex history of glacial dynamics, long-term isolation, and secondary contact have shaped genetic variation in aquatic species. Although the effects of glacial history have been demonstrated in many taxa, responses are often lineage- or species-specific and driven by organismal ecology. In this study, we reconstruct the evolutionary history of a freshwater mussel species complex using a suite of mitochondrial and nuclear loci to resolve taxonomic and demographic uncertainties. Our findings do not support\u00a0Pleurobema rubrum\u00a0as a valid species, which is proposed for listing as threatened under the U.S. Endangered Species Act. We synonymize\u00a0P. rubrum\u00a0under\u00a0Pleurobema sintoxia\u2014a common and widespread species found throughout the Mississippi River Basin. Further investigation of patterns of genetic variation in\u00a0P. sintoxia\u00a0identified a complex demographic history, including ancestral vicariance and secondary contact, within the Eastern Highlands. We hypothesize these patterns were shaped by ancestral vicariance driven by the formation of Lake Green and subsequent secondary contact after the last glacial maximum. Our inference aligns with demographic histories observed in other aquatic taxa in the region and mirrors patterns of genetic variation of a freshwater fish species (Erimystax dissimilis) confirmed to serve as a parasitic larval host for\u00a0P. sintoxia. Our findings directly link species ecology to observed patterns of genetic variation and may have significant implications for future conservation and recovery actions of freshwater mussels.", "description": "14 p.", "publisher": { "@type": "Organization", "name": "Oxford Academic" }, "author": [ { "@type": "Person", "name": "Hubbs, Don W.", "givenName": "Don W.", "familyName": "Hubbs", "affiliation": [ { "@type": "Organization", "name": "DJH Environmental" } ] }, { "@type": "Person", "name": "Lane, Timothy W.", "givenName": "Timothy W.", "familyName": "Lane", "affiliation": [ { "@type": "Organization", "name": "Virginia Department of Wildlife Resoures" } ] }, { "@type": "Person", "name": "McGregor, Monte A.", "givenName": "Monte A.", "familyName": "McGregor", "affiliation": [ { "@type": "Organization", "name": "Kentucky Department of Fish and Wildlife Resources" } ] }, { "@type": "Person", "name": "Moles, Kendall R.", "givenName": "Kendall R.", "familyName": "Moles", "affiliation": [ { "@type": "Organization", "name": "Arkansas Game and Fish Commission" } ] }, { "@type": "Person", "name": "Morrison, Cheryl", "givenName": "Cheryl", "familyName": "Morrison", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0001-9425-691X", "url": "https://orcid.org/0000-0001-9425-691X" }, "affiliation": [ { "@type": "Organization", "name": "Leetown Science Center", "url": "https://www.usgs.gov/centers/eesc" } ] }, { "@type": "Person", "name": "Johnson, Nathan", "givenName": "Nathan", "familyName": "Johnson", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0001-5167-1988", "url": "https://orcid.org/0000-0001-5167-1988" }, "affiliation": [ { "@type": "Organization", "name": "Wetland and Aquatic Research Center", "url": "https://www.usgs.gov/centers/wetland-and-aquatic-research-center" } ] }, { "@type": "Person", "name": "Henderson, Andrew R.", "givenName": "Andrew R.", "familyName": "Henderson", "affiliation": [ { "@type": "Organization", "name": "U.S. Fish and Wildlife Service" } ] }, { "@type": "Person", "name": "Jones, Jess W.", "givenName": "Jess W.", "familyName": "Jones", "affiliation": [ { "@type": "Organization", "name": "U.S. Fish and Wildlife Service, Department of Fish and Wildlife Conservation, Virginia Polytechnic Institute and State University, Blacksburg, VA" } ] }, { "@type": "Person", "name": "Beaver, Caitlin", "givenName": "Caitlin", "familyName": "Beaver", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0002-9269-7604", "url": "https://orcid.org/0000-0002-9269-7604" }, "affiliation": [ { "@type": "Organization", "name": "Wetland and Aquatic Research Center", "url": "https://www.usgs.gov/centers/wetland-and-aquatic-research-center" } ] }, { "@type": "Person", "name": "Ahlstedt, Steve A.", "givenName": "Steve A.", "familyName": "Ahlstedt", "affiliation": [ { "@type": "Organization", "name": "McLung Museum" } ] }, { "@type": "Person", "name": "Dinkins, Gerald R.", "givenName": "Gerald R.", "familyName": "Dinkins", "affiliation": [ { "@type": "Organization", "name": "McLung Museum" } ] }, { "@type": "Person", "name": "Eckert, Nathan L.", "givenName": "Nathan L.", "familyName": "Eckert", "affiliation": [ { "@type": "Organization", "name": "U.S. Fish and Wildlife Service, Genoa National Fish Hatchery" } ] }, { "@type": "Person", "name": "Endries, Mark J.", "givenName": "Mark J.", "familyName": "Endries", "affiliation": [ { "@type": "Organization", "name": "U.S. Fish and Wildlife Service" } ] }, { "@type": "Person", "name": "Garner, Jeffrey T.", "givenName": "Jeffrey T.", "familyName": "Garner" }, { "@type": "Person", "name": "Harris, John L.", "givenName": "John L.", "familyName": "Harris" }, { "@type": "Person", "name": "Hartfield, Paul D.", "givenName": "Paul D.", "familyName": "Hartfield", "affiliation": [ { "@type": "Organization", "name": "U.S. Fish and Wildlife Service, Jackson, MS" } ] }, { "@type": "Person", "name": "Wagner, Matthew D.", "givenName": "Matthew D.", "familyName": "Wagner", "affiliation": [ { "@type": "Organization", "name": "U.S. Fish and Wildlife Service" } ] }, { "@type": "Person", "name": "Williams, James D.", "givenName": "James D.", "familyName": "Williams", "affiliation": [ { "@type": "Organization", "name": "Florida Fish and Wildlife Conservation Commission" } ] }, { "@type": "Person", "name": "Smith, Chase H.", "givenName": "Chase H.", "familyName": "Smith", "identifier": { "@type": "PropertyValue", "propertyID": "ORCID", "value": "0000-0002-1499-0311", "url": "https://orcid.org/0000-0002-1499-0311" }, "affiliation": [ { "@type": "Organization", "name": "Baylor University" } ] } ], "funder": [ { "@type": "Organization", "name": "Wetland and Aquatic Research Center", "url": "https://www.usgs.gov/centers/wetland-and-aquatic-research-center" }, { "@type": "Organization", "name": "Eastern Ecological Science Center", "url": "https://www.usgs.gov/centers/eesc" } ], "spatialCoverage": [ { "@type": "Place", "additionalType": "country", "name": "United States", "url": "https://geonames.org/4074035" }, { "@type": "Place", "additionalType": "unknown", "name": "Mississippi River basin" }, { "@type": "Place", "geo": [ { "@type": "GeoShape", "additionalProperty": { "@type": "PropertyValue", "name": "GeoJSON", "value": { "type": "FeatureCollection", "features": [ { "type": "Feature", "properties": {}, "geometry": { "coordinates": [ [ [ -75.62633202963326, 41.6511669603392 ], [ -95.97480272065495, 40.99979228830361 ], [ -96.85794891517243, 32.703114357715066 ], [ -82.89960066207617, 32.704930262259765 ], [ -75.62633202963326, 41.6511669603392 ] ] ], "type": "Polygon" } } ] } } }, { "@type": "GeoCoordinates", "latitude": 37.27352307777683, "longitude": -87.6297386721365 } ] } ] }, "OpenAlex": { "_id": "https://openalex.org/w4389076806", "abstract_inverted_index": { "Abstract": [ 0 ], "Characterizing": [ 1 ], "the": [ 2, 5, 18, 48, 75, 117, 135, 161, 175, 185, 201 ], "mechanisms": 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Henderson", "orcid": "https://orcid.org/0000-0003-2436-7512" }, "institutions": [ { "id": "https://openalex.org/I1343028186", "display_name": "United States Fish and Wildlife Service", "ror": "https://ror.org/04k7dar27", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1335927249", "https://openalex.org/I1343028186" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "Andrew R Henderson", "raw_affiliation_strings": [ "U.S. Fish and Wildlife Service, Ecological Services , Asheville, NC , United States" ], "affiliations": [ { "raw_affiliation_string": "U.S. Fish and Wildlife Service, Ecological Services , Asheville, NC , United States", "institution_ids": [ "https://openalex.org/I1343028186" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5102708370", "display_name": "Jess W. Jones", "orcid": "https://orcid.org/0000-0001-5623-7945" }, "institutions": [ { "id": "https://openalex.org/I1343028186", "display_name": "United States Fish and Wildlife Service", "ror": "https://ror.org/04k7dar27", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1335927249", "https://openalex.org/I1343028186" ] }, { "id": "https://openalex.org/I859038795", "display_name": "Virginia Tech", "ror": "https://ror.org/02smfhw86", "country_code": "US", "type": "education", "lineage": [ "https://openalex.org/I859038795" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "Jess W Jones", "raw_affiliation_strings": [ "U.S. Fish and Wildlife Service, Virginia Tech University , Blacksburg, VA , United States" ], "affiliations": [ { "raw_affiliation_string": "U.S. Fish and Wildlife Service, Virginia Tech University , Blacksburg, VA , United States", "institution_ids": [ "https://openalex.org/I1343028186", "https://openalex.org/I859038795" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5069692448", "display_name": "Caitlin E. Beaver", "orcid": "https://orcid.org/0000-0002-9269-7604" }, "institutions": [ { "id": "https://openalex.org/I1286329397", "display_name": "United States Geological Survey", "ror": "https://ror.org/035a68863", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1286329397", "https://openalex.org/I1335927249" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "Caitlin E Beaver", "raw_affiliation_strings": [ "U.S. Geological Survey, Wetland and Aquatic Research Center , Gainesville, FL , United States" ], "affiliations": [ { "raw_affiliation_string": "U.S. Geological Survey, Wetland and Aquatic Research Center , Gainesville, FL , United States", "institution_ids": [ "https://openalex.org/I1286329397" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5065915775", "display_name": "Steven A. Ahlstedt", "orcid": null }, "institutions": [ { "id": "https://openalex.org/I75027704", "display_name": "University of Tennessee at Knoxville", "ror": "https://ror.org/020f3ap87", "country_code": "US", "type": "education", "lineage": [ "https://openalex.org/I75027704" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "Steven A Ahlstedt", "raw_affiliation_strings": [ "McClung Museum of Natural History and Culture, University of Tennessee , Knoxville, TN , United States" ], "affiliations": [ { "raw_affiliation_string": "McClung Museum of Natural History and Culture, University of Tennessee , Knoxville, TN , United States", "institution_ids": [ "https://openalex.org/I75027704" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5067009053", "display_name": "Gerald R. Dinkins", "orcid": null }, "institutions": [ { "id": "https://openalex.org/I75027704", "display_name": "University of Tennessee at Knoxville", "ror": "https://ror.org/020f3ap87", "country_code": "US", "type": "education", "lineage": [ "https://openalex.org/I75027704" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "Gerald R Dinkins", "raw_affiliation_strings": [ "McClung Museum of Natural History and Culture, University of Tennessee , Knoxville, TN , United States" ], "affiliations": [ { "raw_affiliation_string": "McClung Museum of Natural History and Culture, University of Tennessee , Knoxville, TN , United States", "institution_ids": [ "https://openalex.org/I75027704" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5001754323", "display_name": "Nathan L. Eckert", "orcid": null }, "institutions": [ { "id": "https://openalex.org/I1343028186", "display_name": "United States Fish and Wildlife Service", "ror": "https://ror.org/04k7dar27", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1335927249", "https://openalex.org/I1343028186" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "Nathan L Eckert", "raw_affiliation_strings": [ "U.S. Fish and Wildlife Service, Neosho National Fish Hatchery , Neosho, MO , United States" ], "affiliations": [ { "raw_affiliation_string": "U.S. Fish and Wildlife Service, Neosho National Fish Hatchery , Neosho, MO , United States", "institution_ids": [ "https://openalex.org/I1343028186" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5082297936", "display_name": "Mark Endries", "orcid": null }, "institutions": [ { "id": "https://openalex.org/I1343028186", "display_name": "United States Fish and Wildlife Service", "ror": "https://ror.org/04k7dar27", "country_code": "US", "type": "government", "lineage": [ "https://openalex.org/I1335927249", "https://openalex.org/I1343028186" ] } ], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "Mark J Endries", "raw_affiliation_strings": [ "U.S. Fish and Wildlife Service, Ecological Services , Asheville, NC , United States" ], "affiliations": [ { "raw_affiliation_string": "U.S. Fish and Wildlife Service, Ecological Services , Asheville, NC , United States", "institution_ids": [ "https://openalex.org/I1343028186" ] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5082709697", "display_name": "Jeffrey T. 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Lane", "orcid": "https://orcid.org/0000-0001-5088-2193" }, "institutions": [], "countries": [ "US" ], "is_corresponding": false, "raw_author_name": "Timothy W Lane", "raw_affiliation_strings": [ "Virginia Department of Wildlife Resources , Marion, VA , United States" ], "affiliations": [ { "raw_affiliation_string": "Virginia Department of Wildlife Resources , Marion, VA , United States", "institution_ids": [] } ] }, { "author_position": "middle", "author": { "id": "https://openalex.org/A5088791997", "display_name": "Monte A. 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